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Name : gspF (APECO1_3460) Accession : YP_854405.1 Strain : Escherichia coli APEC O1 Genome accession: NC_008563 Putative virulence/resistance : Virulence Product : type II secretion protein GspF Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 3383845 - 3385068 bp Length : 1224 bp Strand : - Note : - DNA sequence : ATGGCACTGTTTTACTATCAGGCGCTGGAGCGTAATGGTCGCAAAACCAAAGGCATGATTGAGGCGGATTCCGCGCGTCA TGCCCGTCAATTGTTACGCGGTAAAGACCTCATTCCCGTGCACATTGAAGCCCGGATGAATGCATCGGCAGGGGGATTGT TGCAGCGTCGGCGGCACGCACATCGTCGCGTGGCGACGGCAGATCTGGCGCTGTTCACTCGTCAACTGGCAACGCTGGTG CAGGCAGCAATGCCGCTGGAAACCTGCTTACAGGCGGTCAGTGAGCAAAGCGAAAAACTGCATGTAAAAAGCCTCGGAAT GGCGCTGCGCAGCCGGATTCAGGAAGGTTATACCCTGTCGGACAGCCTGCGCGAACATCCCCGCGTCTTTGACTCCCTGT TTTGTTCGATGGTCGCTGCCGGAGAAAAATCCGGACATCTCGACGTGGTGCTCAATCGCCTGGCGGATTACACCGAACAG CGGCAGCGTCTGAAATCACGCCTGCTGCAGGCCATGCTCTATCCGCTGGTTCTGCTGGTGGTGGCAACGGGCGTAGTCAC TATTTTGCTGACGGCAGTGGTGCCGAAAATTATCGAACAGTTTGATCATCTCGGACACGCGCTACCCGCCTCCACCCGAA TGCTCATCGCTATGAGCGACGCGTTACAGGCCAGCGGCGTGTACTGGCTGGCGGGTTTGCTGGGGCTTCTGGTGCTGGGG CAACGGTTACTCAAAAATCCTGCGATGCGCCTGCGCTGGGATAAAACCTTGCTGCGCCTGCCCGTGACGGGGCGTGTTGC GCGCGGACTGAATACGGCGCGTTTTTCCCGCACGTTAAGCATCCTCACCGCCAGCAGTGTTCCGCTGTTGGAAGGCATTC AGACCGCCGCCGCCGTGTCGGCAAATCGTTATGTCGAGCAACAACTGCTGCTGGCGGCAGATCGCGTCCGCGAAGGAAGC AGCCTGCGCGCCGCGCTGGCGGATCTGCGCCTGTTTCCACCGATGATGCTGTACATGATCGCCTCCGGCGAACAGAGCGG CGAGCTGGAAACCATGCTTGAACAGGCCGCGGTCAACCAGGAACGGGAATTTGATACACAGGTGGGGCTGGCGTTAGGGC TGTTTGAGCCGGCGCTGGTGGTGATGATGGCGGGTGTGGTGCTGTTTATCGTCATCGCCATCCTCGAACCGATGCTGCAA CTGAACAATATGGTTGGAATGTAA Protein sequence : MALFYYQALERNGRKTKGMIEADSARHARQLLRGKDLIPVHIEARMNASAGGLLQRRRHAHRRVATADLALFTRQLATLV QAAMPLETCLQAVSEQSEKLHVKSLGMALRSRIQEGYTLSDSLREHPRVFDSLFCSMVAAGEKSGHLDVVLNRLADYTEQ RQRLKSRLLQAMLYPLVLLVVATGVVTILLTAVVPKIIEQFDHLGHALPASTRMLIAMSDALQASGVYWLAGLLGLLVLG QRLLKNPAMRLRWDKTLLRLPVTGRVARGLNTARFSRTLSILTASSVPLLEGIQTAAAVSANRYVEQQLLLAADRVREGS SLRAALADLRLFPPMMLYMIASGEQSGELETMLEQAAVNQEREFDTQVGLALGLFEPALVVMMAGVVLFIVIAILEPMLQ LNNMVGM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 2e-158 | 100 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-156 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | VFG2049 | Protein | 4e-150 | 97 |
| gspF | YP_854405.1 | type II secretion protein GspF | VFG0181 | Protein | 1e-70 | 47 |
