Gene Information

Name : gspJ (APECO1_3464)
Accession : YP_854401.1
Strain : Escherichia coli APEC O1
Genome accession: NC_008563
Putative virulence/resistance : Virulence
Product : type II secretion protein GspJ
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4795
EC number : -
Position : 3381836 - 3382441 bp
Length : 606 bp
Strand : -
Note : -

DNA sequence : 
GTGAGAAGGGCTCGCGCTGGTTTCACGTTACTGGAAATGCTGGTGGCGATAGCCATTTTTGCCTCACTGGCACTGATGGC
GCAGCAGGTGACAAACGGCGTTACACGCGTGAATAGCGCCGTCGCCGGACACGATCAAAAACTAAACCTCATGCAGCAAA
CGATGAGTTTTCTGACCCACGATCTGACACAAATGATGCCGCGTCCGGTAAGAGGCGATCAGGGCCAGCGTGAACCAGCG
TTACTGGCGGGCGCTGGCGTTCTGGTGTCTGAGAGTGGAGGAATGCGTTTTGTGCGCGGCGGTGTGGTTAACCCGTTGAT
GCGTCTGCCACGCAGCAATCTGCTCACCGTCGGTTACCGCATTCATGACGGTTATCTCGAACGGTTAGCCTGGCCACTGA
CCGATGCGGCAGGCAGCGTGAAGCCAACAACGCAAAAATTAATCCCGGCGGATTCGCTCCGTTTGCAGTTCTACGACGGC
ACGCGCTGGCAGGAGAGCTGGTCATCAGTGCAGGCGATTCCTGTGGCAGTACGCATAACCCTGCATTCGCCACAATGGGG
CGAAATTGAACGCATCTGGTTGTTACGCGGGCCGCAATTATCATGA

Protein sequence : 
MRRARAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNSAVAGHDQKLNLMQQTMSFLTHDLTQMMPRPVRGDQGQREPA
LLAGAGVLVSESGGMRFVRGGVVNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGSVKPTTQKLIPADSLRLQFYDG
TRWQESWSSVQAIPVAVRITLHSPQWGEIERIWLLRGPQLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspJ YP_854401.1 type II secretion protein GspJ Not tested PAI I APEC-O1 Protein 3e-91 100
gspJ CAE85228.1 GspJ, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-84 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspJ YP_854401.1 type II secretion protein GspJ VFG2053 Protein 5e-84 97