Gene Information

Name : gspL (APECO1_3466)
Accession : YP_854399.2
Strain : Escherichia coli APEC O1
Genome accession: NC_008563
Putative virulence/resistance : Virulence
Product : GspL-like protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3297
EC number : -
Position : 3379687 - 3380547 bp
Length : 861 bp
Strand : -
Note : similar to general secretory pathway protein L

DNA sequence : 
GTGATTCACCAGCAGCATATGCGCAACATTGCGCAGTGGTTGCAGGCAAACGGCATCACCCGCGCTACCGTCGCGCCGGA
CTGGATGTCCATTCCTTGTGGGTTTATGGCTGGCGATGCGCAACGGGTTATCTGCCGCATCGATGAATGCCGGGGATGGA
GCGCCGGGCGGGCGCTGGCTCCGGTCATGTTCCGCGCACAGCTCAATGAGCAGAATTTACCGATTTCACTAACTGTGGTC
GGCATTGCACCGGAAGAACTGTCTGCATGGGCTGGTGCGGACGCCGAACGCCTGACCGTTACGGCTCTGCCCGCCATTAC
CACTTATGGCGAATCGGAAGGGAACCTGCTAACAGGGCCGTGGCAGCCTCGTGTCAGCTACCGAAAACAGTGGGCGCGCT
GGCGGGTGATGATTCTGCCGATATTGCTGATTCTGGTTGCGCTGGTAGTGGAACGGGGCGTGACGTTATGGAGCGTCAGC
GAACAGGTGGCGCAAAGCCGCACCCAGGCGGAAAAAAAGTTCTTAACACTGTTCCCGGAGCAGAAGCGGATTGTGAATTT
GCGTTCCCAGGTGACGATGGCGCTGAAAAAATATCGCCCGCAGGCCGATGATACCCGGCTGCTCGCCGAGTTGTCAGCGA
TAGCCAGCACCCTGAAATCAGCATCACTTTCCGACATCGAAATGCGTGGTTTCACCTTTGATCAAAAACGCCAGACGCTC
CATCTTCAGTTGCGGGCCGCGAACTTTGCCAGTTTCGACAAACTGCGTAGCGCACTGGCGGCAGATTATGTTGTGCAACA
GGACGCGTTACAGAAAGAGGGTGATGCGGTTTCCGGCGGCGTAACGTTGCGGAGGAAATAA

Protein sequence : 
MIHQQHMRNIAQWLQANGITRATVAPDWMSIPCGFMAGDAQRVICRIDECRGWSAGRALAPVMFRAQLNEQNLPISLTVV
GIAPEELSAWAGADAERLTVTALPAITTYGESEGNLLTGPWQPRVSYRKQWARWRVMILPILLILVALVVERGVTLWSVS
EQVAQSRTQAEKKFLTLFPEQKRIVNLRSQVTMALKKYRPQADDTRLLAELSAIASTLKSASLSDIEMRGFTFDQKRQTL
HLQLRAANFASFDKLRSALAADYVVQQDALQKEGDAVSGGVTLRRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspL YP_854399.2 GspL-like protein Not tested PAI I APEC-O1 Protein 3e-123 100
gspL CAE85226.1 GspL, hypotehtical type II secretion protein Not tested PAI V 536 Protein 5e-119 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspL YP_854399.2 GspL-like protein VFG2055 Protein 7e-120 97