|
Name : gspM (APECO1_3467) Accession : YP_854398.1 Strain : Escherichia coli APEC O1 Genome accession: NC_008563 Putative virulence/resistance : Virulence Product : general secretion pathway protein YghD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3149 EC number : - Position : 3379149 - 3379685 bp Length : 537 bp Strand : - Note : - DNA sequence : ATGTTACGCGATAAATTTATTCACTATTTTCAGCAATGGCGTGAACGCCAGTTAAGCCGTGGCGAACACTGGCTGACACA ACACTTGGCGGAGCGTTCTCCGCGCGAAAAGGGCATGTTACTGGCAGCGGTGGTGTTCCTGTTTAGCGTCGGATATTACG TCCTCATCTGGCAGCCGTTGAGCGAACGGATAGAACAACAGGAGACGATGTTGCAACAGCTGGTGGCAATGAACACCCGA CTGAAGAACGCCGCGCCGGATATTATTGCAGCGCGAAAATCTGCCACAACAACGCCTGCGCAGGTATCGCGGGTCATCAG TGACAGTGCTTCCGCGCACTCGGTGGCCATCAAGCGGATAGCCGAGCGTGGGGAGAATATTCAGGTCTGGATAGAACCTG TGGTGTTTAATGACCTTCTGAAATGGTTAAACGCACTGGATGAAAAATATGCGCTGCGGGTGACACAAATTGATGTCAGT GCTGCTGAGAAGCCTGGGATGGTGAATGTGCAGCGGCTGGAGTTTGGACGGGGGTAG Protein sequence : MLRDKFIHYFQQWRERQLSRGEHWLTQHLAERSPREKGMLLAAVVFLFSVGYYVLIWQPLSERIEQQETMLQQLVAMNTR LKNAAPDIIAARKSATTTPAQVSRVISDSASAHSVAIKRIAERGENIQVWIEPVVFNDLLKWLNALDEKYALRVTQIDVS AAEKPGMVNVQRLEFGRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspM | YP_854398.1 | general secretion pathway protein YghD | Not tested | PAI I APEC-O1 | Protein | 8e-80 | 100 |
| gspM | CAE85225.1 | GspM, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-78 | 97 |
| yghD | CAI43907.1 | putative secretion pathway protein | Not tested | LEE | Protein | 1e-78 | 97 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspM | YP_854398.1 | general secretion pathway protein YghD | VFG2056 | Protein | 8e-58 | 97 |
