Gene Information

Name : APECO1_3492 (APECO1_3492)
Accession : YP_854319.1
Strain : Escherichia coli APEC O1
Genome accession: NC_008563
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2378
EC number : -
Position : 3352598 - 3353278 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence : 
ATGTCTGATAATCGTTCCCGGCATGATCGCCTGGCGGTTCGCTTATCACTCATTATCAGCCGACTGATGACCGGAGAATC
TCTGTCACTAAAAACACTGTCAGATGAATTTGGCGTTACAGAACGTACTTTACAGCGCGATTTTCATCAGCGTCTGGTTC
ACCTGGATTTAGAGTACAGAAATGGCAGGTACAGCCTCAGACGACAGAGCAGCCCGGGTGCGATCCCTGAAATGCTTTCT
TTTATACAGAATACCGGGATCGCACGGATACTTCCGCTCCGGAACGGACGACTGATAACCTGTCTTACCGACAACCAGGA
GCCCTCTCCCTGCCTTATCTGGCTACCGGCGCCGGATATCACTGCAACGTTCCCCGAGTGTTTCTCGCAACTCATCCTGG
CAATAAGACAGTGTATCCACATCTCTCTGATGGCTGAGCGATGGTATCCGTCACTGGAGCCCTGCCGGCTCATTTATTAC
AGCGGTAGCTGGTATCTGATCGCGTTACAGAAGGGAAAACTGCAGGTCTTTCCTCTGGCAGATATCAAATCAGTCAGCCT
GACATCAGAACGGTTTGAACGGAGAGGCCACATCCACAATCTGGTCGCTGAAGAGCGTTTTATCTCCGCCCTGCCACATT
TCTCTTTCATCCATAAACTTATCAACACCTTTAACCTGTGA

Protein sequence : 
MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYRNGRYSLRRQSSPGAIPEMLS
FIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDITATFPECFSQLILAIRQCIHISLMAERWYPSLEPCRLIYY
SGSWYLIALQKGKLQVFPLADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yfjR AAZ04453.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 2e-104 100
APECO1_3492 YP_854319.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 3e-104 100
c5160 NP_757008.1 transcriptional regulator YfjR Not tested PAI II CFT073 Protein 1e-103 99
unnamed CAD33782.1 hypothetical protein Not tested PAI I 536 Protein 2e-103 99
unnamed CAD42094.1 hypothetical protein Not tested PAI II 536 Protein 4e-104 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APECO1_3492 YP_854319.1 transcriptional regulator VFG1523 Protein 9e-104 99
APECO1_3492 YP_854319.1 transcriptional regulator VFG1613 Protein 2e-104 99