Gene Information

Name : APECO1_3502 (APECO1_3502)
Accession : YP_854308.1
Strain : Escherichia coli APEC O1
Genome accession: NC_008563
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3969
EC number : -
Position : 3337984 - 3339216 bp
Length : 1233 bp
Strand : -
Note : -

DNA sequence :
ATGAATGATAATTTATTAACGGAGAAAGTCCTTACTGGAGAGAATGTTCTGCGTGCAGCAATTGCTCGTATTGAGTGGAT
TTTTGAAACATTTCCATCAGTTTGTCTCTCTTTTTCCGGGGGTAAAGATTCCACCGTGCTTTTCCATCTTTTGGCTGATG
TGGCCCGCAGGAAAAAACGTCGTTTCTCTGTACTGTTTATTGACTGGGAGGCTCAGTACCAGTGCACCATTGAACATATT
CAGAAGATGCGGGAAATGTACCATGATGTGACGGAAACCTTTTACTGGGTGGCACTTCCCCTGACCACGGTAAACGGCGT
CTCGCAGTTTCAGCCGGAGTGGATATGCTGGGAGCCAGGAGTGACCTGGGTTCGCCAGCCACCGGAAGAGGCCATTACAG
ACATGACGTATTTCCCATTTTATCGGTATGCCATGACGTTTGAAGAATTTGTTCCGGCATTTTCTTCCTGGTTTGCAGAC
AATAAATGTGGTGTGGCAGTACTGACCGGTGTCCGTGCGGATGAGTCCCTTAACCGGTTCATGGGACTGGTGTCCCAGCG
CAAACTGAGATACGCCGATGATAAGCCCTGGACCACGGCATCGCCTGAAGGGTTTTACTACACCATGTATCCACTGTATG
ACTGGAAAACTCGTGATATCTGGATATATCACACCAGAACCCGTGCCATCTACAATCCCCTGTATGACCTGATGTACCGT
GCCGGCGTACCGTTACGCAACATGCGTGTCTGTGAACCTTTTGGTCCTGAACAACGTAAGGGACTGTGGCTTTACCATGT
TCTGGAGCCGGATACCTGGGCCAGGATGTGTGAGCGGGTATCAGGGGCTGCCAGCGGGGCACTTTATGCCAATGAAAGCG
GTGCTTATTTTGCCCTGCGCAAGCGCATATCAAAACCAGCCCATCATACCTGGCGCAGCTACGCGATGTTTCTGCTGGAT
GTGATGCCGGAAAGAACAGCAGAACATTACCGCAACAAGATAGCTGTCTATCTGCGCTGGTATCAGACGCGGGGCTTCCC
GGATGACATTCCCGATGAACAGGAGAATGACCTGGGCTGCCGGGATATCCCGTCCTGGCGACGTATCTGTAAGACTCTTA
TAAAGAATGATTTCTGGTGCCGGACGCTGTCCTTCAGCCCGAACAAACCCCGGCACTATGAACGTTACCTGCAGCGTATG
AAGGAAAGGAGGAATGAATGGGGGATTCTGTGA

Protein sequence :
MNDNLLTEKVLTGENVLRAAIARIEWIFETFPSVCLSFSGGKDSTVLFHLLADVARRKKRRFSVLFIDWEAQYQCTIEHI
QKMREMYHDVTETFYWVALPLTTVNGVSQFQPEWICWEPGVTWVRQPPEEAITDMTYFPFYRYAMTFEEFVPAFSSWFAD
NKCGVAVLTGVRADESLNRFMGLVSQRKLRYADDKPWTTASPEGFYYTMYPLYDWKTRDIWIYHTRTRAIYNPLYDLMYR
AGVPLRNMRVCEPFGPEQRKGLWLYHVLEPDTWARMCERVSGAASGALYANESGAYFALRKRISKPAHHTWRSYAMFLLD
VMPERTAEHYRNKIAVYLRWYQTRGFPDDIPDEQENDLGCRDIPSWRRICKTLIKNDFWCRTLSFSPNKPRHYERYLQRM
KERRNEWGIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3502 YP_854308.1 hypothetical protein Not tested PAI I APEC-O1 Protein 0.0 100
c5209 NP_757057.1 hypothetical protein Not tested PAI II CFT073 Protein 0.0 100
ORF_31 AAZ04441.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 0.0 100
ibrA ADD91735.1 putative phosphoadenosine phosphosulfate reductase IbrA Not tested PAI-I AL862 Protein 0.0 96
Z1643 NP_287146.1 hypothetical protein Not tested TAI Protein 0.0 95
Z1643 AAQ19139.1 putative phosphoadenosine phosphosulfate reductase Not tested PAI I CL3 Protein 0.0 95
Z1203 NP_286738.1 hypothetical protein Not tested TAI Protein 0.0 95
z1203 CAD33763.1 Z1203 protein Not tested PAI I 536 Protein 0.0 92
STY4583 NP_458667.1 conserved hypothetical protein Not tested SPI-7 Protein 4e-177 87
t4277 NP_807875.1 hypothetical protein Not tested SPI-7 Protein 3e-177 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APECO1_3502 YP_854308.1 hypothetical protein VFG1504 Protein 0.0 92