Gene Information

Name : APECO1_3514 (APECO1_3514)
Accession : YP_854261.1
Strain : Escherichia coli APEC O1
Genome accession: NC_008563
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3326574 - 3327140 bp
Length : 567 bp
Strand : -
Note : -

DNA sequence : 
ATGCCTAAATCTTACACACCAAACTGGTTTTTTACCGCTTTACTTGACAATCACATCAATCAAATGATGGCACGCTATTC
CTGCCTGCGGGCCTTACGCATGGATTTCTTCTACAGGAAAGATACGCCTGATTTCTTACAACCTGATCATCGCTGGCTTG
AATTGCAGTTGCGTATGCTGCTGGAGCAGGTGGAACAATTTGAAAATATCGTTGGCTTCTTCTGGGTGATTGAATGGACG
GCTGATCATGGTTTTCATGCGCATGCGGTTTTCTGGATCGATCGTCAGAGGGTTAAAAAAATATATCCCTTTGCGGAGCG
GATTACGGAATGCTGGCGGTCTATTACGCATAACAGCGGTTCGGCGCACTGCTGTACATATCAGCCGCATTATACATACA
ACATCAACATTCCTGTGCGCCATAACGAGCCTGAAAGCATCGATAATATTCGCGGTGCCCTGCATTATCTGGCGAAAGAA
GAGCAAAAAGACGGGCTGTGTGCCTACGGCTGCAGTGAAGTTCCTGAGCGTCCTGCAGCAGGGCGTCCACGTAAGCTTCA
GAAGTGA

Protein sequence : 
MPKSYTPNWFFTALLDNHINQMMARYSCLRALRMDFFYRKDTPDFLQPDHRWLELQLRMLLEQVEQFENIVGFFWVIEWT
ADHGFHAHAVFWIDRQRVKKIYPFAERITECWRSITHNSGSAHCCTYQPHYTYNINIPVRHNEPESIDNIRGALHYLAKE
EQKDGLCAYGCSEVPERPAAGRPRKLQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3514 YP_854261.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-87 100
ORF_20 AAZ04430.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-87 100
unnamed CAD33737.1 hypothetical protein Not tested PAI I 536 Protein 8e-85 99
unnamed CAD42062.1 hypothetical protein Not tested PAI II 536 Protein 2e-82 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APECO1_3514 YP_854261.1 hypothetical protein VFG1478 Protein 3e-85 99
APECO1_3514 YP_854261.1 hypothetical protein VFG1581 Protein 8e-83 95