Gene Information

Name : papJ (APECO1_3523)
Accession : YP_854252.1
Strain : Escherichia coli APEC O1
Genome accession: NC_008563
Putative virulence/resistance : Virulence
Product : PapJ protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3318717 - 3319298 bp
Length : 582 bp
Strand : -
Note : -

DNA sequence : 
ATGGTTGTGAATAAAACAACAGCAGTACTGTATCTTATTGCACTGTCGCTGAGTGGTTTCATCCATACTTTCCTGCGGGC
TGAAGAGCGGGGTATATACGATGACGTCTTTACTGCAGATGAGTTGCATCATTACCGGATAAATGAACGGGGGGGGCGCA
CCGGAAGCCTGGCCGTCAGTGGTGCACTGCTGTCCTCCCCCTGCACGCTGGTGAGTAATGAGGTGCCGTTAAGCCTCCGG
CCGGAGAATCACTCTGCGTCAGCCGGAGCACCTCTGATGCTGAGGCTGGCAGGATGTGGGGACGGTGGTGCACTTCAGCC
CGGAAAACGGGGCGTTGCGATGACAGTCTCCGGCTCACTGGTAACCGGTCCCGGAACCGGAAGTGCTTTACTTCCTGACC
GTAAGCTATCCGGCTGTGACCATCTTGTTATACACGATGGTGATACCTTTTTACTGTGCCGGCCTGACCGGCGGCAGGAG
GAGATGCTGGCCGCCTGGAGGAAAAGGGCGACACAGGAGGGTGAGTATTCTGATGCCAGGAGCAATCCGGCCATGCTGCG
TCTGAGCATAAAATATGAGTAA

Protein sequence : 
MVVNKTTAVLYLIALSLSGFIHTFLRAEERGIYDDVFTADELHHYRINERGGRTGSLAVSGALLSSPCTLVSNEVPLSLR
PENHSASAGAPLMLRLAGCGDGGALQPGKRGVAMTVSGSLVTGPGTGSALLPDRKLSGCDHLVIHDGDTFLLCRPDRRQE
EMLAAWRKRATQEGEYSDARSNPAMLRLSIKYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papJ AAZ04422.1 P pilus protein Virulence PAI I APEC-O1 Protein 1e-81 100
papJ YP_854252.1 PapJ protein Virulence PAI I APEC-O1 Protein 2e-81 100
papJ YP_002414013.1 protein PapJ , P pilus assembly Not tested Not named Protein 2e-80 99
papJ NP_755463.1 PapJ protein Virulence PAI I CFT073 Protein 1e-79 98
papJ_2 NP_757032.1 PapJ protein Virulence PAI II CFT073 Protein 1e-79 98
papJ AAL67412.1 PapJ Virulence PAI II CFT073 Protein 8e-80 98
prfJ CAD42027.1 PrfJ protein Virulence PAI II 536 Protein 9e-81 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
papJ YP_854252.1 PapJ protein VFG0897 Protein 3e-80 98
papJ YP_854252.1 PapJ protein VFG1546 Protein 4e-81 98