Gene Information

Name : papE (APECO1_3525)
Accession : YP_854250.1
Strain : Escherichia coli APEC O1
Genome accession: NC_008563
Putative virulence/resistance : Virulence
Product : PapE protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3539
EC number : -
Position : 3317623 - 3318144 bp
Length : 522 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAGATAAGAGGTTTGTGTCTTCCGGTAATGCTGGGGGCAGTGTTAATGTCTCAGCATGTACATGCAGTTGATAA
TCTGACCTTCAGAGGAAAACTGATTATTCCTGCCTGTACTGTAAGCAACACAACTGTTGACTGGCAGGATGTAGAGATTC
AGACCCTGAGTCAAAATGGAAATCACGAAAAAGAGTTTACTGTGAATATGCGGTGTCCCTATAATCTGGGAACAATGAAG
GTTACGATAACGGCAACAAACACTTATAACAATGCTATTTTAGTTCAGAATACATCAAACACATCTTCTGATGGGTTACT
CGTTTATCTTTATAACAGTAATGCAGGAAATATTGGGACTGCGATAACTTTAGGGACTCCATTTACGCCCGGAAAAATCA
CAGGTAATAATGCAGATAAAACTATATCACTTCATGCCAAACTTGGATATAAAGGGAATATGCAGAATTTGATAGCCGGT
CCTTTCTCTGCAACAGCAACGCTGGTTGCATCATATTCGTAA

Protein sequence : 
MKKIRGLCLPVMLGAVLMSQHVHAVDNLTFRGKLIIPACTVSNTTVDWQDVEIQTLSQNGNHEKEFTVNMRCPYNLGTMK
VTITATNTYNNAILVQNTSNTSSDGLLVYLYNSNAGNIGTAITLGTPFTPGKITGNNADKTISLHAKLGYKGNMQNLIAG
PFSATATLVASYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papE YP_854250.1 PapE protein Virulence PAI I APEC-O1 Protein 5e-71 100
papE AAZ04420.1 P pilus tip protein Virulence PAI I APEC-O1 Protein 3e-71 100
papE NP_755460.1 PapE protein Virulence PAI I CFT073 Protein 1e-65 92
papE_2 NP_757029.1 PapE protein Virulence PAI II CFT073 Protein 1e-65 92
prfE CAD42025.1 PrfE protein Virulence PAI II 536 Protein 3e-59 73
prsE YP_002414011.1 Fimbrial protein Not tested Not named Protein 8e-52 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
papE YP_854250.1 PapE protein VFG0899 Protein 4e-66 92
papE YP_854250.1 PapE protein VFG0888 Protein 4e-66 92
papE YP_854250.1 PapE protein VFG1544 Protein 1e-59 73