Gene Information

Name : APECO1_1087 (APECO1_1087)
Accession : YP_853107.1
Strain : Escherichia coli APEC O1
Genome accession: NC_008563
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2151091 - 2151708 bp
Length : 618 bp
Strand : +
Note : -

DNA sequence : 
GTGAGGAATATGAAAATGAAACAACAGTATCAGACCCGTTACGAGCTGCTCCATGAAAACTACCAGAAATGGCTGACCGG
CTTCACCCGGCACGCCGTATCATGGGGCGTGTGTCATCCGAATATCTACTATTTCCATAATCTGACGCCCGGGTGGGTGT
CATTCAATGGCGAAAAACCGGAGATTGCCATCGTTCCCCAGAGTCTGCACCGGCTGATTTATGGTCCGGACAAACGGAGC
TCCCCGTCCCTGGATGATGATCTGGTGGTGAATTTATGCACCAGCGAACACCTGCTGGTTCATCATCCGATGCTGGAAGG
GATCCTGCTGTCTGAATGTGAGCGCCTGAAGCAACATTCTCTGGCAAACAAACTGATCAGCCTCTTCCCTCAGTTTGGCG
GCACGGAGTTACGTCTCAAACTGGTCTGGCTCTGCTGGCTTGACTTAATGACCGGAAACAGCCTTGACGACTGGACGAAA
AACCTGAAACACAAATCAGAAAAAGATCTGGAGCAATGGATCATTGCACGTCAGGGTCAGAGTGAACCACTGACAAATCT
GATGGATCAGTACGTGCTTATGGCATACCGTACATCGGTTGATGCCGCTCACAGTTGA

Protein sequence : 
MRNMKMKQQYQTRYELLHENYQKWLTGFTRHAVSWGVCHPNIYYFHNLTPGWVSFNGEKPEIAIVPQSLHRLIYGPDKRS
SPSLDDDLVVNLCTSEHLLVHHPMLEGILLSECERLKQHSLANKLISLFPQFGGTELRLKLVWLCWLDLMTGNSLDDWTK
NLKHKSEKDLEQWIIARQGQSEPLTNLMDQYVLMAYRTSVDAAHS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1087 YP_853107.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-94 100
ECO103_3578 YP_003223439.1 hypothetical protein Not tested LEE Protein 1e-86 88
unnamed ADD91711.1 putative acyl-CoA dehydrogenase Not tested PAI-I AL862 Protein 3e-85 88
unnamed AAL08467.1 unknown Not tested SRL Protein 7e-86 88
unnamed CAI43836.1 hypothetical protein Not tested LEE Protein 2e-88 88
aec62 AAW51745.1 Aec62 Not tested AGI-3 Protein 1e-69 86
unnamed CAE85188.1 hypothetical protein Not tested PAI V 536 Protein 7e-85 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APECO1_1087 YP_853107.1 hypothetical protein VFG1058 Protein 3e-86 88