Gene Information

Name : APECO1_1084 (APECO1_1084)
Accession : YP_853104.1
Strain : Escherichia coli APEC O1
Genome accession: NC_008563
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2148710 - 2149315 bp
Length : 606 bp
Strand : -
Note : -

DNA sequence : 
GTGGCTATTCCGTATGAACCATACGGAGATTTAACCATGACCTACAAATACAACCCCTTCTGGCAGCAACGTATTCGTGA
GACGGTGCGGCACGCACTGAATGTTCATCCCCGCCTGACGGCATTGCGGGTTGACCTGCGTTTCCCGGATGTACCGGCAG
CAACGGACGCAGCTGTGATATCCCGCTTCATCAATGCCCTGAAAGCCCGAATCGACGCTTACCAGAAACGTAAGCATCGG
GAAGGTAAACGCGTGCATCCCACAACCCTGCATTACGTCTGGGCCCGGGAGTTTGGGGAGTGCAAAGGTAAAAAACACTA
TCACCTGATGCTGCTGGTTAACCGGGATACCTGGTGTCGTGCCGGTGATTACCGTGCTCCGGGATCACTGGCCGGGATGA
TTAAACAGGCGTGGTGCAGTGCCCTGGGAGTGGATGTCGGGTGCCATGCCACGCTGGTGCATTTTCCGGCCTGGCCGGCG
GTGTGGCTGGAACGCGATGATGACACTGGCTTTCAGCAGGTGCTGGAACGTGCTGACTATCTGGCGAAGGAACATACCAA
AGCTCACTGCACCGGTGAGCGCAATTTTGGCTGTAGCCGGAGTTGA

Protein sequence : 
MAIPYEPYGDLTMTYKYNPFWQQRIRETVRHALNVHPRLTALRVDLRFPDVPAATDAAVISRFINALKARIDAYQKRKHR
EGKRVHPTTLHYVWAREFGECKGKKHYHLMLLVNRDTWCRAGDYRAPGSLAGMIKQAWCSALGVDVGCHATLVHFPAWPA
VWLERDDDTGFQQVLERADYLAKEHTKAHCTGERNFGCSRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1084 YP_853104.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 1e-93 100
unnamed AAL08464.2 unknown Not tested SRL Protein 3e-86 98
unnamed AAW51744.1 Aec61 Not tested AGI-3 Protein 1e-82 95
unnamed ADD91714.1 hypothetical protein Not tested PAI-I AL862 Protein 7e-83 95
ECO103_3573 YP_003223434.1 hypothetical protein Not tested LEE Protein 7e-82 95
unnamed CAI43834.1 hypothetical protein Not tested LEE Protein 3e-80 93
unnamed CAD42091.1 hypothetical protein Not tested PAI II 536 Protein 5e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APECO1_1084 YP_853104.1 hypothetical protein VFG1055 Protein 1e-86 98
APECO1_1084 YP_853104.1 hypothetical protein VFG1610 Protein 2e-35 41