Gene Information

Name : APECO1_1082 (APECO1_1082)
Accession : YP_853102.1
Strain : Escherichia coli APEC O1
Genome accession: NC_008563
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2147654 - 2148148 bp
Length : 495 bp
Strand : -
Note : -

DNA sequence : 
ATGTCACCACGATTATTATGGGGAGCGGTACTGCACACACTGCCAGACCGGAGGATTCAGTATTCCCCGGACAACTCAGG
AGGAAATATGCGAATTCTGAACTGTTATATGGCGAATGACAGCAAAGGCCATTTTGTTACGGCGAAAGAAGCAGCGAAGC
ACAACCGCCAGGACGTTTTGTGCTGTGTGTCCTGTGGATGCCCATTAACACTTCAGCGGGGCAATGACGGACAACCACCG
TGGTTTGAACATGACCAGATGACTGTCGCTGAGAAAATCCTGCTGCGATGCACCTGGCTTGACCCGGCAGAGAAAGAGGC
CCGTCGTTTGCATCTGCAGGGTATGACGGTTCCGGATTATACGGTGAAGGTGAGAAAGTGGTTTTGTGTGATGTGTGACG
AAAATTATGAGGGGGAAAAGTGCTGCCCGAGTTGTGGTACCGGGGTATACAGCAGGGAGGGGGGGCAGGAGGGCAACTGG
AAGGATAGGAACTGA

Protein sequence : 
MSPRLLWGAVLHTLPDRRIQYSPDNSGGNMRILNCYMANDSKGHFVTAKEAAKHNRQDVLCCVSCGCPLTLQRGNDGQPP
WFEHDQMTVAEKILLRCTWLDPAEKEARRLHLQGMTVPDYTVKVRKWFCVMCDENYEGEKCCPSCGTGVYSREGGQEGNW
KDRN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1082 YP_853102.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-74 100
unnamed AAL08463.1 unknown Not tested SRL Protein 2e-69 99
unnamed CAI43832.1 hypothetical protein Not tested LEE Protein 2e-67 96
unnamed ADD91716.1 hypothetical protein Not tested PAI-I AL862 Protein 8e-54 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APECO1_1082 YP_853102.1 hypothetical protein VFG1054 Protein 1e-69 99