Gene Information

Name : APECO1_1077 (APECO1_1077)
Accession : YP_853097.1
Strain : Escherichia coli APEC O1
Genome accession: NC_008563
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5426
EC number : -
Position : 2142522 - 2143280 bp
Length : 759 bp
Strand : +
Note : -

DNA sequence : 
ATGAATAACACCAAAAAATCACTAAAGGTGCTCTTTATTGGAGAATCCTGGCATATTCATATGATTCATTCAAAAGGATA
TGACAGTTTTACCTCAAGTAAATATGAAGAAGGTGCGACCTGGTTACTCCAATGTCTGAAAAATAGTCAGGTAGATGTCA
CCTATATGCCGGCACATACGGTACAAATTGCCTTCCCTGAAGATGTGGCACAGTTAGAACAATATGATGCCATCGTTATT
AGTGATATTGGTAGTAATACTTTCCTGCTACAAAATGATACTTTTTATCAGCTTCGCATAAAACCAAACGCTCTCGAACT
GATTAAAGAATATGTGAATAACGGTGGTGGGTTATTGATGATTGGCGGCTATCTCTCATTCATGGGAATTGAAGCAAAAG
CCAATTATAAAAATACAGTTCTGGCTGATGTGCTCCCGGTTACGATGTTAGATGGTGACGATCGTGTCGAAAAACCAGAG
GGTGTTATTGCACAGCCATCACAACCTGACCATCCGGTTATTAAAGGGTTCTCTGAATATCCTTTTTTCCTAGGTTATAA
CCGGGCGATCGCTAAAGAAAATGCTGAGGTGGTATTAACAATAAACAACGATCCATTACTGGTCTTTGGTAACTATCACA
ACGGGAAAATAGCCTGCTTTATGAGTGACTGTTCACCGCACTGGGGTACACAGCAGTTTATGTCCTGGCCGTTCTATACC
GCGTTGTGGGTAAATATACTGACTCATATTGCAAGATAA

Protein sequence : 
MNNTKKSLKVLFIGESWHIHMIHSKGYDSFTSSKYEEGATWLLQCLKNSQVDVTYMPAHTVQIAFPEDVAQLEQYDAIVI
SDIGSNTFLLQNDTFYQLRIKPNALELIKEYVNNGGGLLMIGGYLSFMGIEAKANYKNTVLADVLPVTMLDGDDRVEKPE
GVIAQPSQPDHPVIKGFSEYPFFLGYNRAIAKENAEVVLTINNDPLLVFGNYHNGKIACFMSDCSPHWGTQQFMSWPFYT
ALWVNILTHIAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1077 YP_853097.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 6e-117 100
ORF 245 CAB37418.1 - Not tested SPI-2 Protein 2e-79 66
STY1741 NP_456145.1 Orf 245 protein Not tested SPI-2 Protein 7e-79 66
t1249 NP_805053.1 hypothetical protein Not tested SPI-2 Protein 7e-79 66
SC1402 YP_216389.1 hypothetical protein Not tested SPI-2 Protein 3e-79 66
orf245 NP_460346.1 hypothetical protein Not tested SPI-2 Protein 3e-79 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APECO1_1077 YP_853097.1 hypothetical protein VFG0482 Protein 1e-79 66