Gene Information

Name : APECO1_633 (APECO1_633)
Accession : YP_852647.1
Strain : Escherichia coli APEC O1
Genome accession: NC_008563
Putative virulence/resistance : Virulence
Product : chaperone protein fimC precursor
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 1640088 - 1640807 bp
Length : 720 bp
Strand : -
Note : -

DNA sequence : 
ATGCATCAGATGCAAACTACGCGTACCCCCTACTCTGTTTCCTTTATGGCGACAGTGTTACTTTTATTGCTCTTTGCTTG
CCATAGCACCATTGCCAACGCAGCTGTCGCACTTGGTGCGACGCGGGTAATTTATCCGGCAAACCAGAAACAGGTTTTAT
TGCCTGTCACGAATAATGATCCTGCCAGTGTCTATCTCATTCAGTCATGGATAGAAAATGCGGGTGACCAGAAAGATACC
CAGTTTGTCATTACCCCACCGCTTTTTTCCATGCAAGGTAAAAAAGAGAATACGCTTCGGATAATCAACGCCACTAATCA
TCAGTTACCAGGCGACCGTGAAAGCCTGTTCTGGGTTAATGTTAAAGCTATCCCTGCTATGGAAAAAGACCAGAAGAATG
AGAATACATTACAGCTGGCAATTATTAGCCGCATAAAAATGTTTTATCGCCCCACGCATCTGGCAATGGCACCTGAAGAA
GCGCCTGCAATGCTTCGGTTTCGTCGCAGCGGTAGCAAACTCACTCTTATTAATCCAACGCCCTACTTCATTACCGTAAC
AAATATGAAAGCAGGAAATAGCAATCTCCCAAACACCATGGTGCCGCCAAAAGGTGAAGTATCGGTGGATATCCCGCATG
CTGTAACCGGGGATATCAGTTTTCAGACAATCAATGATTACGGTGCATTAACTCCGCGTATTAAGGCAACCATGCAGTAA

Protein sequence : 
MHQMQTTRTPYSVSFMATVLLLLLFACHSTIANAAVALGATRVIYPANQKQVLLPVTNNDPASVYLIQSWIENAGDQKDT
QFVITPPLFSMQGKKENTLRIINATNHQLPGDRESLFWVNVKAIPAMEKDQKNENTLQLAIISRIKMFYRPTHLAMAPEE
APAMLRFRRSGSKLTLINPTPYFITVTNMKAGNSNLPNTMVPPKGEVSVDIPHAVTGDISFQTINDYGALTPRIKATMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 8e-68 65
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 9e-66 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APECO1_633 YP_852647.1 chaperone protein fimC precursor VFG0911 Protein 3e-66 64
APECO1_633 YP_852647.1 chaperone protein fimC precursor VFG1644 Protein 5e-66 64
APECO1_633 YP_852647.1 chaperone protein fimC precursor VFG0875 Protein 5e-70 59
APECO1_633 YP_852647.1 chaperone protein fimC precursor VFG0445 Protein 6e-58 48