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Name : umuD (APECO1_295) Accession : YP_852310.1 Strain : Escherichia coli APEC O1 Genome accession: NC_008563 Putative virulence/resistance : Unknown Product : DNA polymerase V subunit UmuD Function : - COG functional category : K : Transcription COG ID : COG1974 EC number : - Position : 1241927 - 1242346 bp Length : 420 bp Strand : + Note : binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization DNA sequence : ATGTTGTTTATCAAGCCTGCGGATCTCCGCGAAATTGTGACTTTTCCGCTATTTAGCGATCTTGTTCAGTGTGGCTTTCC TTCACCGGCCGCAGATTACGTTGAACAGCGCATCGATCTGAATCAACTGTTGATCCAGCATCCCAGCGCGACTTATTTCG TCAAAGCAAGTGGTGATTCTATGATTGATGGTGGGATTAGTGACGGTGATTTACTGATTGTCGATAGCGCTATTACCGCC AGCCATGGTGATATTGTCATCGCTGCTGTTGACGGTGAGTTTACGGTGAAAAAATTGCAACTACGCCCGACGGTACAGCT TACTCCTATGAACAGTGCGTACTCGCCCATTACCATCAGTAGCGAAGATACGCTGGATGTCTTTGGTGTGGTGATCCACG TCGTTAAGGCGATGCGCTGA Protein sequence : MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITA SHGDIVIAAVDGEFTVKKLQLRPTVQLTPMNSAYSPITISSEDTLDVFGVVIHVVKAMR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| t06650 | YP_006892470.1 | hypothetical protein | Not tested | SPI-7 | Protein | 5e-18 | 55 |
| unnamed | ABR13390.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 4e-11 | 48 |
| rulA | CAI36138.1 | SOS-response transcriptional repressor | Not tested | PPHGI-1 | Protein | 3e-09 | 42 |
