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Name : gabD (lwe0897) Accession : YP_849096.1 Strain : Listeria welshimeri SLCC5334 Genome accession: NC_008555 Putative virulence/resistance : Unknown Product : succinate semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 926260 - 927726 bp Length : 1467 bp Strand : + Note : - DNA sequence : TTGAGTATGAAAGAAGCGACATTACCAAAAGTTCAAACAAAATTATTTATTAATGGAGAATGGATAGACGGAGATAATAA AGAAACAAAAGATATTGTAAACCCAGCAAACGGAGAGGTTATTGCAAAAGTAGTGCAAGCAGGACCTAATGAAACAAAAC AAGCCATTAATGCCGCAAAAGAAGCTTTTCCAGATTGGGCTAAAATGGAATTAGCTGACCGTGTTAAATTATTGCACAAA ATTGCTGATTTAATGGAAGAAAGAGCAGATACCTTAGCCAAAATTATGACAATTGAACAAGGTAAACCACTAAAAGAATC AAAAGGAGAAGTCCTAACGGGTGCTGAAAACTTCCGATTCGCCGCAGAAGAAGCAAGAAGATTATATGGTGAAACAATTC CTGCTCCAAATAATCATGCTTTTATTGTTAAAAAACAACCAATAGGTGTAGTTGCTGCGATTACCCCGTGGAATTTCCCA GGTGGAATGGTTACACGAAAACTTGCGCCAGCGCTTGCAACTGGTAATACTATTGTTCTTAAACCTTCCGGAGATACACC TCTTTCGGCTTTAGCTATCTTTGAAATATTTGAAGAAGCTGGCTTACCAAAAGGTGTTGCCAATATTGTAATGGGTAGCT CAAAAGAAATCGGTGAAACATTAACTGATAGTGACGACGTTCGTAAATTAACTTTCACCGGTTCTACTAAAGTCGGTCAA ACGCTATTTAAACAATCAGCAGAGACATTGAAGAAAATCTCACTTGAACTTGGTGGACATGCACCATTTATCGTATTTGA TGATGCTAATTTAGATGCGGCTGTGAATGATTTAGTCGCAGCAAAATTCCGTAATAACGGTCAAGTATGCGTATCACCAA ACCGGATTTTTGTAGCTAAAGAAATCAAAGACAAATTCACGAAAGCTCTTGTTTCCGAAGTTGAAAAATTAAAAGTTGGT AACGGTTTGGGTGATGTGAATGTTGGCCCACTTATTCGTGAAGATGCGATAGATAAAATCGATAAACAACTTAAAAACGC TACAGATAAAGGCGCTAAAGTCCTTACTGGTGGTGGGCGTCTAACCGGCTCAGACTATGATAAAGGAAACTTTTACAAAC CAACTGTCTTAGATAATGTCACTCGTGAAATGGATATTTTCTATGAAGAAACATTTGGTCCAGTCATCCCACTAATCACT TTTGAAACAGAAGACGAAGCAATTGAAATGGCAAACGATAGTGAATTCGGATTAGCTTCTTACTTCTATACAAAAGATTT AGCACGCGTGGAAAAAGTAGGATCTGCTTTAGAATATGGAATGGTTGGTGCAAATGAAATCGCCATTTCCAATCCAGAAA CCCCATTTGGTGGCGTAAAACATTCTGGCTTTGGTCGTGAAAACGGACATTACGGAATGGAAGAATACATCCAAGTGAAA TTCATCAACTTAAAATATCGTGATTAA Protein sequence : MSMKEATLPKVQTKLFINGEWIDGDNKETKDIVNPANGEVIAKVVQAGPNETKQAINAAKEAFPDWAKMELADRVKLLHK IADLMEERADTLAKIMTIEQGKPLKESKGEVLTGAENFRFAAEEARRLYGETIPAPNNHAFIVKKQPIGVVAAITPWNFP GGMVTRKLAPALATGNTIVLKPSGDTPLSALAIFEIFEEAGLPKGVANIVMGSSKEIGETLTDSDDVRKLTFTGSTKVGQ TLFKQSAETLKKISLELGGHAPFIVFDDANLDAAVNDLVAAKFRNNGQVCVSPNRIFVAKEIKDKFTKALVSEVEKLKVG NGLGDVNVGPLIREDAIDKIDKQLKNATDKGAKVLTGGGRLTGSDYDKGNFYKPTVLDNVTREMDIFYEETFGPVIPLIT FETEDEAIEMANDSEFGLASYFYTKDLARVEKVGSALEYGMVGANEIAISNPETPFGGVKHSGFGRENGHYGMEEYIQVK FINLKYRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-103 | 52 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 2e-75 | 41 |
