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Name : lwe0881 (lwe0881) Accession : YP_849080.1 Strain : Listeria welshimeri SLCC5334 Genome accession: NC_008555 Putative virulence/resistance : Unknown Product : transcriptional accessory RNA-binding protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 911322 - 913499 bp Length : 2178 bp Strand : + Note : - DNA sequence : ATGGAACAAATGCAAGATAAAATAATAAAATTAGTCCAAAAATCGCTTAGTTATAAACCAGCGCAAATTAATGCCGTTAT TAAATTAATGGAAGAAGGCAACACGGTCCCATTTATTGCACGTTACCGTAAAGAAATGACTGGTAGCCTAGATGAAGTGG AAATTCGCGATATTGAAGAAACATTTGAATACGTTACTAAATTAGAAAATCGTAAAGAAGAAATTATTCGCTTAATAGAT GAACAAGGGAAATTAACAGACGAACTGAGAGCGGCAATCATCCAAGCAGAAAAACACCAAGCATTAGAAGATTTATATCG CCCCTACAAACAAAAGAAACGCACCAAAGCAACAATTGCCAAAGAAAAAGGATTAGAACCGCTTGCAGATTGGCTAATGA GCTTTCCAAGCGATGCTGATCCACTGAAAGAAGCAGCAAACTACATTTCAGAAGATAAAGAAGTCGAGACAGCAGAATCA GCCTTACTTGGCGCACATGAAATTATCGCTGAACAAATCAGTGATGAGCCTAGTTTTCGAGAGTGGATTCGTAATTTTAC TCGCAAATTTGGCATGATTGAATCTAGAGCAAAAAACGCTGAAGCAGATGAAAAAGGCGTTTACGAAATGTATTATGAAT TTAACGAAATGATTGGCAAAGTAGCTAGTCACCGCATACTTGCATTTAATCGCGGAGAAAAAGAAGATATTTTACGTGTA CAAGTACAAGTAGATACAACAAAAATCTTCCAATATTTATTTGAAAAAGTTATCCAAAACCGTAATTCTGCAACACGTCC TTATGTAGAAGAGGCGATTTTAGATGCTTATAAACGTTTTATCGGACCTGCAATTGAACGTGAAATTCGCGGCGAATTAA CTGAGAAAGGCGAAGAACAAGCGATTCATATTTTCTCTGAGAACTTGCGCAAATTGCTTCTACAACCACCTTTAAAAGGA AAAATAATTCTTGGTGTGGATCCAGCTTTTAGAACAGGTTGTAAATTCTCTGTACTAGATCAAACAGGTAAAGTGCTAGA AATCGGTGTTGTTTATCCACATACAGCTAAAGCACGCCGACCAGAAGCAAAACAAAAGATTGCTGAGATTTTATCCACTT ATCAAGTAGAAGTTATTGCGATTGGTAATGGAACGGCATCACGTGAAACAGAGCAATTTATCGTTGAGGTTATTCGTGAA TCGAATTCTAATGCTTATTATTGTATCGTTAATGAAGCTGGCGCAAGTGTGTATTCTGCAAGTGAAACAGCTCGCGAAGA GTTCCCAGATTATCAAGTAGAAGAACGGAGCGCGGTTTCTATCGGAAGACGCTTGCAAGATCCATTAGCAGAACTTGTAA AAATCGATCCTAAGTCAGTGGGAGTGGGACAATACCAACATGATGTAGCCCAAAAACGATTAAATGAAACATTGACTTTT GTTGTTGAAACTGCTGTTAACCAAGTAGGAGTCAATGTAAATACAGCGTCTGCTTCCCTTTTACAATATGTTGCAGGCTT AAATAAAACAGTCGCTAATAATATTCGTAAATACCGCGAAGAAAATGGTTCGTTCACATCACGTAAAGCATTGAAAAAAG TTCCTCGTCTCGGCGCGAAATCATATGAACAAAGTATTGGCTTCTTACGTATCCTAGAAGGCGACAATCCGCTTGATAAA ACAGCTATTCACCCTGAAAGCTATAAAGCAGCTGAGCAAATCGTGAAAGCAGCCGGTTTTGATTTGAGTGATATTGGTAG TGAGGACCTTAAAGCAGCGTTACAAGCACTTAGCATTCCAGAAGAAGCAGAAAAACTAGGCATTGGTAAAGAAACAATGC GTGATATTATTGATAATTTAATAGCTCCAGGGCGTGATCTTCGTGATGAACTTCCGGCACCACTTTTAAAACAAGATGTT ATTTCGATGGAAGATTTAAAACAAGGAATGGAATTACAAGGAACTGTTCGTAACGTTGTTGACTTTGGCGCTTTTGTTGA TATTGGCGTAAAACAAGACGGACTTGTGCACATTTCAAAACTGAGTAATTCCTTTGTTAAAAACCCAATGGATGTCGTTT CAGTAGGAGATGTTGTAACTGTTTGGGTTGATGAAGTAGATACGAAGAAAAACCGAATTGCTTTAACAATGCGTAACCCA AATGGAAGTGTTAAATAA Protein sequence : MEQMQDKIIKLVQKSLSYKPAQINAVIKLMEEGNTVPFIARYRKEMTGSLDEVEIRDIEETFEYVTKLENRKEEIIRLID EQGKLTDELRAAIIQAEKHQALEDLYRPYKQKKRTKATIAKEKGLEPLADWLMSFPSDADPLKEAANYISEDKEVETAES ALLGAHEIIAEQISDEPSFREWIRNFTRKFGMIESRAKNAEADEKGVYEMYYEFNEMIGKVASHRILAFNRGEKEDILRV QVQVDTTKIFQYLFEKVIQNRNSATRPYVEEAILDAYKRFIGPAIEREIRGELTEKGEEQAIHIFSENLRKLLLQPPLKG KIILGVDPAFRTGCKFSVLDQTGKVLEIGVVYPHTAKARRPEAKQKIAEILSTYQVEVIAIGNGTASRETEQFIVEVIRE SNSNAYYCIVNEAGASVYSASETAREEFPDYQVEERSAVSIGRRLQDPLAELVKIDPKSVGVGQYQHDVAQKRLNETLTF VVETAVNQVGVNVNTASASLLQYVAGLNKTVANNIRKYREENGSFTSRKALKKVPRLGAKSYEQSIGFLRILEGDNPLDK TAIHPESYKAAEQIVKAAGFDLSDIGSEDLKAALQALSIPEEAEKLGIGKETMRDIIDNLIAPGRDLRDELPAPLLKQDV ISMEDLKQGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKKNRIALTMRNP NGSVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 4e-126 | 44 |
