|
Name : nifJ (lwe0820) Accession : YP_849021.1 Strain : Listeria welshimeri SLCC5334 Genome accession: NC_008555 Putative virulence/resistance : Virulence Product : pyruvate-flavodoxin oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : - Position : 847975 - 851628 bp Length : 3654 bp Strand : + Note : - DNA sequence : ATGCGAAATAGAAAAACGATGGATGGAAACACTGCCGCAGCCAATATTTCTTACGCATTTACAGAAGTTGCAGCAATCTA TCCAATTACCCCTTCCTCCACTATGGCTGAACTCGTGGATGAATGGTCATCAAAAAACAAGAAAAATTTATTTAATGAAC CCGTAAAAGTAGTGGAAATGCAATCAGAAGCAGGAGCAGCAGGGACAGTTCATGGATCACTTCAAGCAGGAGCCTTAACG AGCACATACACAGCGAGTCAAGGTTTACTTTTAATGATTCCGAATATGTACAAAATTGCTGGAGAATTATTGCCCACAGT TTTTCATGTATCTGCAAGAACAATTTCGGCGGCCTCGCTTAATATTTTCGGCGACCATAGTGATGTGATGGCAGCGCGTC AAACTGGATTTGCGATGCTCGCAGAAGGTTCTGTGCAAGAAGTAATGGACTTATCCGCCGTAGCTCATCTGGCATCGCTG AAAGGAAGCTTGCCATTTTTAAACTTTTTTGATGGATTCCGGACAAGTCACGAATTACAAAAAATCGAAGTGCTTGAATA TGAGGAATTAGAAAGTTTGCTTGACAAAGAGGCCTTACAACAATTCAGAAATCGCGCAATGACGCCTAATAATCCGAAAA CATTAGGCTCGAACCAGAACCCGGATATCTTTTTTCAACAAAGGGAAACAGTGAATCGTTATTACGAGGAAATTCCAAAT ATCGTTCAGAACTATATGCAAGAAATTAATCAGCTACGTGGCACAGATTATGACTTAGTAAATTATTATGGTGCGGAAGA TGCAACAGATGTCGTTGTAGCGATGGGGTCTGTAACGCCGGTCATTGAGCAAGTTATTGATTATTTAACAACCCAAGGCA AGAAAGTTGGACTGCTCAATATTCGTTTATATCGTCCTTTCCCAGCTGACAACTTTTTAGCGAAACTTCCGAAAACAGTA GAACGTGTGGCTGTTTTAGACCGAACAAAAGAACCAGGTTCAGGTGGGGAGCCACTTTTACTCGATGTACAAAGTGTGCT TTATGATAGTGAGACGCGACCTCTCGTTATTGGCGGTAGATATGGCTTAGGTTCAAAAGATGTGACACCAGACCAGATTC TCGGTGTTTATTCGCACCTAATGACAGAAAAACCAAAACCTCGTTTCACCATTGGTATTACAGATGATATTACGAATCTC TCCATTGAAAATAGGGGACCAAGTGATTTAACGTCAGAAAAAACGTTCCAATGTAAATTCTGGGGCTTTGGCTCGGACGG TACGGTAGGCGCTAATAAAGCCGCCATTAAGATTATTGGTGATAATACAGATTTATATGCGCAAGGTTACTTTTCCTATG ATTCGAAAAAATCGGGGGGACTAACCGTTTCGCATCTACGCTTTGGAGAAAAAAGAATTCGTTCTGCTTATTTAATCCAA CAGGCGGATTTTGTTTCTTGCTCAACCTCGGCCTATTTACGTTCGTATGATTTATTAAAAGGCTTAAAACCGGGCGGAAC ATTTTTACTTAATACAATTTGGGAAGGCAAGCAGTTAGAACGCCATTTACCAGCAGCAATGCGTGCATATATTGCAAAAA ACGATATTCAATTTTATACATTAAATGCGATGAAAATTGCTGGGGAAGCTGGACTGGGCAGAAGAATTAATACTGTCATG CAAACAGCCTTTTTCCAAGTGACTGATATCTTACCGTTTGAAAAAGCTCTCGCTGACTTAAAAGAATCGGCTATCGCGAC TTACGGAAAAAAAGATATGGCCGTTGCGGAAAAAAATATCCTCGCGATGGATCAAACAGTCGCTCATTTGCATAAAGTAG AAGTGCCTGAAAGCTGGGCAAATCAAGAATTAAAAGTAGAAATAAATCCAACTACCGAAAAACCCGCTTACGTTAAAAAT ATCTTGGAACCTGTAAATCGGCTAGAAGGTGATAACTTAACCGTTGGAGATTTAATATCAAACGGAATGGTTAGTGGCGC TTATCCTCCAGGGACAGCAGCTTATGAAAAACGTGGAATTGCACTTGAAGTTCCTGAATGGATTTCTGAAAACTGTACGA TGTGTAATGAATGTGCTTTTGTTTGTCCACATGCAGCTATTCGGCCGATTTTAACAAACGAAGAAGAGATGGAGTCTGCG CCAGAAGGCTTTATGACACGCGAAATGCGAGGAAAAGATGGCCTTCGTTACCGTATTCAAGTTTCACCAATGGACTGTAC CGGCTGTAACTTATGTGCGGAAACTTGTCCTGCAAAAGAAAAAGCGCTTGTAATGAAACCTTTTGAAGAAGTTGCTGAAA AAGAAAATCCGAATTGGTCATTTGCCATTAATGTGAAACCAAAGAAAAATCCAACTAAAAAAAATACCGTTCCTGGTAGT CAATTCGAACAACCTTTACTTGAGTTCTCTGGGGCTTGTGCTGGCTGTGGCGAAACCCCTTATGTTAAATTATTAACGCA AATGTTTGGTGATCGGATGATGATTGCCAATGCAACTGGTTGTTCCTCGATTTGGGGCGCATCCGCACCAGCAACTCCGT ATACTGTCAATGATAAAGGACATGGTCCGGCTTGGGGGAATTCACTTTTAGAAGATAACGCGGAATATGGTTACGGCATG TATTTAGCAAACCAAACCATGCGAAAAGCGCTAAACAATAAAGTCACAAAAGCACTAAAAGAAGAAACTATGTCATTAGC TTTACATGAGGCACTTGTCGACTGGCAAACACAAATGGATGTTTCAGAAGATACGCGCGGGCGAGCAGAAACCTTACAAC TTGCGCTTCTTAGTGAGATGGAAGGAAATCCAACACTCGAATCCATTTATAATGACCGTGAATTGTTTATTAAACGTTCG CAGTGGATGCTTGGAGGCGATGGTTGGGCTTATGATATTGGCTTCGGAGGAATTGATCATGTGTTAGCATCAGGAGAAGA TGTGAATATTTTTGTAATGGATAATGAAGTCTACTCAAACACAGGCGGCCAATCATCCAAAGCCACACCAACTGCTGCTA TTGCTAAATTTGCTTCAGGCGGAAAATCTGTCGGTAAAAAAGATCTTGGCATAATGGCTATGAGTTACGGAAATATTTAT GTGGCGCAAATCGCGATGGGTGCGAACAAACGCCAAACTTTAAAAGCAATTGAAGAAGCAGAAGCATATCCAGGGCCTTC TTTAATCATTGCCTATACTCCATGTATAAATCATGGAATTTCAAGTGGTATGAAAACAATGCTAAGTGAAACACAAAAAG CGGTGGAATGTGGCTACTGGAGCTTATATCGTTATAATCCAGCACTGGAAGAAAAAGGAAAAAATCCAATGATCATGGAC TATAAAAAAGTTGATTTTGATCAATTTGAAGATTTCCTAAAACGGGAGACACGTTATTCCGCGCTATATAAAGCAAATCC AGAAGTAGCAACGAAACTATCTGAAAAAACTCGATTAGACGCTGAAAAACGTTTCAACCGTTATGCTACAATGGCAGGAT TAGATTTAGAAAAAATAACGAAGAAAAAAGAAACCACAAAAGAAGACAAAATGGAAAAACCAGTGGATGACGAACGCGCG GCTAGAAAAGCTGCACGGGAAGCAAGAAGACTGGCACGAGAACAAAGTGAATAA Protein sequence : MRNRKTMDGNTAAANISYAFTEVAAIYPITPSSTMAELVDEWSSKNKKNLFNEPVKVVEMQSEAGAAGTVHGSLQAGALT STYTASQGLLLMIPNMYKIAGELLPTVFHVSARTISAASLNIFGDHSDVMAARQTGFAMLAEGSVQEVMDLSAVAHLASL KGSLPFLNFFDGFRTSHELQKIEVLEYEELESLLDKEALQQFRNRAMTPNNPKTLGSNQNPDIFFQQRETVNRYYEEIPN IVQNYMQEINQLRGTDYDLVNYYGAEDATDVVVAMGSVTPVIEQVIDYLTTQGKKVGLLNIRLYRPFPADNFLAKLPKTV ERVAVLDRTKEPGSGGEPLLLDVQSVLYDSETRPLVIGGRYGLGSKDVTPDQILGVYSHLMTEKPKPRFTIGITDDITNL SIENRGPSDLTSEKTFQCKFWGFGSDGTVGANKAAIKIIGDNTDLYAQGYFSYDSKKSGGLTVSHLRFGEKRIRSAYLIQ QADFVSCSTSAYLRSYDLLKGLKPGGTFLLNTIWEGKQLERHLPAAMRAYIAKNDIQFYTLNAMKIAGEAGLGRRINTVM QTAFFQVTDILPFEKALADLKESAIATYGKKDMAVAEKNILAMDQTVAHLHKVEVPESWANQELKVEINPTTEKPAYVKN ILEPVNRLEGDNLTVGDLISNGMVSGAYPPGTAAYEKRGIALEVPEWISENCTMCNECAFVCPHAAIRPILTNEEEMESA PEGFMTREMRGKDGLRYRIQVSPMDCTGCNLCAETCPAKEKALVMKPFEEVAEKENPNWSFAINVKPKKNPTKKNTVPGS QFEQPLLEFSGACAGCGETPYVKLLTQMFGDRMMIANATGCSSIWGASAPATPYTVNDKGHGPAWGNSLLEDNAEYGYGM YLANQTMRKALNNKVTKALKEETMSLALHEALVDWQTQMDVSEDTRGRAETLQLALLSEMEGNPTLESIYNDRELFIKRS QWMLGGDGWAYDIGFGGIDHVLASGEDVNIFVMDNEVYSNTGGQSSKATPTAAIAKFASGGKSVGKKDLGIMAMSYGNIY VAQIAMGANKRQTLKAIEEAEAYPGPSLIIAYTPCINHGISSGMKTMLSETQKAVECGYWSLYRYNPALEEKGKNPMIMD YKKVDFDQFEDFLKRETRYSALYKANPEVATKLSEKTRLDAEKRFNRYATMAGLDLEKITKKKETTKEDKMEKPVDDERA ARKAAREARRLAREQSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 53 |
