|
Name : lwe0608 (lwe0608) Accession : YP_848809.1 Strain : Listeria welshimeri SLCC5334 Genome accession: NC_008555 Putative virulence/resistance : Resistance Product : heavy metal-translocating P-type ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 644545 - 646422 bp Length : 1878 bp Strand : + Note : - DNA sequence : ATGAAAGAATGGATGAAACGGAATTGGCAATTTGTAACGACTGGTATTAGTGGGATTTTAATTATTGTAGGGTGGTTAGT CGGCAATGAAGTCGGTGATTTTTGGACTGCAGTAATTTTTCTGAGTGCGTTTGTTATCGGTGGTTTTGAACAAGCCAAAG AAGGAATTCAAGCAACTATTAAAACGAAAAAGTTAAATGTAGAACTATTGATGATTTTAGCGGCTACAGGTGCTTCAATC ATCGGTTATTGGTTTGAAGGTGCCATACTAATCTTTATTTTTTCCGTTAGTGGGGCTTTAGAGACGTATACAACAAATAA AAGTAAACGCGAAATTACGAAATTGATGGCGTTTCAACCAGAGCGAGCATTTCTTTTACTACCAAATGGAGATTTAAAAG AAATTGCTGCAAAAGATTTACAATTGGATGATATGGTATTAGTTCGACCCGGAGAAAGTGTGCCAATAGATGGGGTTATT GTTCGTGGTTCGACAACTTTAAACGAAGCGGCAATTAATGGCGAATCAGTGCCTGCCATGAAATCTGCTGGTTCGGAAGT GTTTGGTGGAACAGTCAATGTAAGTAGTGCTATTACGGTTAAAGTAACTCAAACTTTCGATAATACGATTTTCAGTAAGA TTATTCGGTTAGTAGAAACAGCTCAAAGCGAACCTTCCAAAACAGCGCGTTTTATTGAACGGTTTGAAGATGCTTATGTC AAAGCAGTGTTGTTGTTTGTTTTAGTAATGATGTTTTTACCACATTTTGCGCTAGGATGGTCTTGGAATGAGACTTTTTA TCGGGCGATGGTTTTATTAACGGTTGCTTCTCCGTGTGCATTAGTGGCATCAGTGACTCCTGCGACATTAGCGGCAATTT CTAATGGTGCACGCCATGGTATTTTATTTAAAGGCGGTGTACACTTAGAAAATTTGCGTGGTATAAAGGCGATCGCATTT GATAAAACAGGGACTCTAACAAATGGAACTCCAGTTTTAACAGATCGATTGTTTGCAGAAAATGTTGATAAACAGGAAAT AATAAATATGGTTGTGGCATTAGAACGGCAATCTTTACATCCATTGGCTGCGGCAATTACACAAGATTTGGATGCAGAAG TAACGAAAAATATAACAGAAATAGAAATAACAGACGTCCCTGGTTGGGGAGTGCAAGCGGATTATAAAGGAGAGATATGG CAAGTTGGTAAAGCTGGTTTTGTTGGAACAGAGAGCGCTAGAGAGTTTTTGAGTGGTGCCTTTGAGAAACTTGCTAGTGA AGGGAAAACCGTTGTCTATGTTGCTAAATCGGGTGTTGTATTAGCGATGTTTGCACTTAAAGATACCTGCAGACCTGAAG CGATGCGCACAATTAAAGCTCTTCAAGCAAAAGGAATTAAAACTATTATGGTAACGGGTGATAATGAACAAACTGGTGCA GCAATACAAGCCGAATTAGGCATGGATCAAGTAGTTTCTGGATGTTTGCCTGAGAAAAAAGTAGATGTGATAAAAGAATT ATCGGTATCATATGGAAGTGTAGCGATGGTTGGTGATGGAATTAATGATGCACCCGCTCTTGCGCATGCGGCGGTTGGTA TTGCCATGGGAAAAGGGACGGATATCGCAATGGAAACAGCAGATGTCGTCTTAATGAAAAATGATTTAGAAAAAATTCCA TATGCCTTCGCACTTTCCAAACGACTTTACTGGATTAGCTGGCAAAATATTTGTTTTGCAATAGCAGTAATATTGGTTCT AATAACGGCTAATGTCTTCCAACTGATTAATTTGCCATTTGGGGTAGTTGGTCATGAAGGAAGTACCATACTAGTCATTC TAAATGGATTAAGATTGCTTAAATCTAATCAAAGGTAG Protein sequence : MKEWMKRNWQFVTTGISGILIIVGWLVGNEVGDFWTAVIFLSAFVIGGFEQAKEGIQATIKTKKLNVELLMILAATGASI IGYWFEGAILIFIFSVSGALETYTTNKSKREITKLMAFQPERAFLLLPNGDLKEIAAKDLQLDDMVLVRPGESVPIDGVI VRGSTTLNEAAINGESVPAMKSAGSEVFGGTVNVSSAITVKVTQTFDNTIFSKIIRLVETAQSEPSKTARFIERFEDAYV KAVLLFVLVMMFLPHFALGWSWNETFYRAMVLLTVASPCALVASVTPATLAAISNGARHGILFKGGVHLENLRGIKAIAF DKTGTLTNGTPVLTDRLFAENVDKQEIINMVVALERQSLHPLAAAITQDLDAEVTKNITEIEITDVPGWGVQADYKGEIW QVGKAGFVGTESAREFLSGAFEKLASEGKTVVYVAKSGVVLAMFALKDTCRPEAMRTIKALQAKGIKTIMVTGDNEQTGA AIQAELGMDQVVSGCLPEKKVDVIKELSVSYGSVAMVGDGINDAPALAHAAVGIAMGKGTDIAMETADVVLMKNDLEKIP YAFALSKRLYWISWQNICFAIAVILVLITANVFQLINLPFGVVGHEGSTILVILNGLRLLKSNQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | YP_005732869.1 | cadmium-translocating P-type ATPase | Not tested | Type-V SCCmec | Protein | 8e-108 | 44 |
| SE0062 | NP_763617.1 | copper-transporting ATPase copA | Not tested | SCCpbp4 | Protein | 6e-108 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lwe0608 | YP_848809.1 | heavy metal-translocating P-type ATPase | BAC0092 | Protein | 4e-112 | 45 |
