Gene Information

Name : lwe0358 (lwe0358)
Accession : YP_848559.1
Strain : Listeria welshimeri SLCC5334
Genome accession: NC_008555
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 375286 - 375960 bp
Length : 675 bp
Strand : +
Note : -

DNA sequence : 
ATGATACAGCTTTTTAATATTTCAAAAACGTATCAAATGGGAGAAGATACGATAAAAGCATTAGATAATTTATCTTTACA
AGTTACAAAAGGTGAATTTATTGCGATTATTGGACCATCTGGTTCTGGAAAATCTACATTAATGAATATTATAGGAATAT
TAGATCGAGCTAGTTCAGGAGAATACTATCTTAACAAAATGAATTTAATGCGAATATCAGATAAAAAGATTTCTAAAATC
AGAAATAAAAAAATAGGTTTTATTTTTCAACAATTCAATTTAATGCCGCGACTTACTGCTTTTGAAAATGTGGAATTACC
ACTCATTTATCGAGGAACAAGTAAGCCAACTCGAAAGAAAATTGTCTTAAAAAGTTTAGAACGTGTCGGTTTGTTGGAGA
AACAAAAACATTTACCCGCACAGCTTTCAGGCGGACAGCAACAACGAGTTGCGATAGCTAGAGCGATTGCAGGAAATCCA
GAAATTATTCTGGCAGATGAACCAACAGGCGCACTTGATTCTAAAACAGGTGAAGAAGTAATGCGTTTATTAAAGGAAAT
TCATAGAGAAGGAAATACGTTGATTATGATTACACATGACAAAACAATTGCTGAACAAGCGGAACGAATAATAGAAATAA
AAGACGGAAAACTCCGTGAATGGAATAATCTATGA

Protein sequence : 
MIQLFNISKTYQMGEDTIKALDNLSLQVTKGEFIAIIGPSGSGKSTLMNIIGILDRASSGEYYLNKMNLMRISDKKISKI
RNKKIGFIFQQFNLMPRLTAFENVELPLIYRGTSKPTRKKIVLKSLERVGLLEKQKHLPAQLSGGQQQRVAIARAIAGNP
EIILADEPTGALDSKTGEEVMRLLKEIHREGNTLIMITHDKTIAEQAERIIEIKDGKLREWNNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 4e-28 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-31 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-29 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lwe0358 YP_848559.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-52 55
lwe0358 YP_848559.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 9e-37 47
lwe0358 YP_848559.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 5e-33 46
lwe0358 YP_848559.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-38 45
lwe0358 YP_848559.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 4e-25 44
lwe0358 YP_848559.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 1e-27 42