|
Name : kdpD (lwe2628) Accession : YP_850825.1 Strain : Listeria welshimeri SLCC5334 Genome accession: NC_008555 Putative virulence/resistance : Unknown Product : sensor histidine kinase Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2205 EC number : - Position : 2655280 - 2657970 bp Length : 2691 bp Strand : - Note : - DNA sequence : ATGGAGACGAATCGTCCAAGTCCGGATGCGCTACTAGTGAATTTGCAAGAAGAAACAGATTCATCAGTAGGTAAATTAAA AATATATTTTGGATTTGCAGCGGGTGTTGGAAAAACATACGCAATGTTAAGTGATGCCAAAGATCAACTAGCGGCAGGCG TAGATGTAGTGGCGGGCTATATTGAACCTCATGCCAGAGAAGAAACGTTAAGAATGCTAGAAGGAATCCCACTTATTTCA CCTAAAGCAATCAACCATAAAAACATTGCGCTCAAAGAATTCGATTTGGACGAAGCGTTGAAACGGAAACCAGAACTGAT TTTGGTGGACGAACTCGCACATACGAATGCGGCAGGCGTGCGCAATAAGAAACGTTTTCAAGATGTGGAAGAACTGCTCC AAGCGGGAATCGATGTATATACGACTGTCAATGTACAACATATTGAAAGTTTGAATGATATTGTTGAAGGTATTACTAAA GTGGCTGTGCGCGAAACTATTCCTGACTATGTTTTTGATGAGGCGGATCGCGTAAAACTAATTGATATCGAACCAGACGA GCTTTTAAAACGTCTAGAACAAGGCAAAATTTATCGACCGGAACGTGCGCAAACTGCCATGCAGAACTTTTTTACTAGGG AAAATCTGAAACTACTGCGCGAAATTGCGATGCGTAAAGCAGCCGACCGAATTAGTCACGAATATGATCAAACTGGTGTA TATCCAGAAAAACGCGCAAGTAGTAAATGGCTAGTCTGTATTGGAACGTCTCCTTCATCGGCAAAACTCATTCGCTGGAC AGCGCGCACTGCCGAGGCTTTCCGTGCTCCATGGACTGCTCTTTATATTGAAAATGAAGAAAATGATTATATGACTAAAG CAGAGAAAAAATGTCTGCGGGAAACGATGGAACTCGCTGAACGACTTGGCGCGGAAATTGTCACGCTCGCTGGACATGAT ATTGCAGAAACGGTAGCCGAGTATGCTCGTTTGACTGGTGTGACAAATATCGTTGTTGGAAAATCACGCCGACGTATGGG TCTGCGTTCTTTATTTGAAGAGGATTTTGAAGACCGGCTTATTACACATTTGGATAACGTAGATATGCACATTATTCCTT CAAGCCATCCAAAAACAAAAAAGCGTCGAATGAAAATGCGTTTTAAAAACTTTCTCTCATGGCATGATATGGCAAAAATG GTCCTATTACTAACTCTAGCAACAGCAATATGCGTTGGTTTAAGTGAATTTGGCATTGGCGATCAAAATGTTATTATGGT GTATATTTTGTCTGTTTTAATTATTTCTCGTGTAACAAGTGGTTATGCATATGGTGTTTTAGGATCTATTATTGGTGTGA TGTTATTTAACTTCTTTTTCACATCGCCGCTTTACACATTTAATACGATTCAAGCAGGGTATCCAGTGACTTTTGGGATT ATGCTATTAGTTGCGCTAATTACGAGTGCGCTAACTGTTCGAATTAAAACGCAGGCTAGTCTTGCTGTTGAACGTGAACG TCGAACGGAAGTGCTTTATGAAATCAACAAACGACTACTAGTAACCCGGAATTTAAAAGGAATTATTGATTTAACCAATG AATATATTTTGCACTTATTTAACCGGTCCGTTGTTTTTTATTCGGTAGATCCTGCAAAAAGCAATAAAGGGATTTTCATG CAAGCAGAAGGAAAAGAGGATGCGAGCGCGCTTCTTAGTCCAGATGAAGAAGCTGTTGCCCACTGGGTTTTTAAAAATAA AAAGAGAGCAGGCGCAGGAACGGATACATTAATGGGAGCATTTGGTTATTATATGCCTGTTATGTCGCAAGGGAAAGTGC TTGGCGTTATCGGTGTTTCTTGCTCACAAGAAGAAGGTCCACTTACTCAAGATAACCGGATATTTTTACGCATGATCAGT TCTCAGGTCGCACTGGCTTTAGAACGGCAATACTTATCAGAAGAACAGCGCCAAATCGTCATTGAATCCGCGAAAGAAAA GATGAGAAGTAATTTGCTTCGGGCAATTTCACATGATTTAAGAACACCGCTCACTGGTATTGTTGGAGCGAGTTCTGCCT TGCTTGAAAAAGAAACGGAATTAGATAAAGAAACAGAACGCAACTTAATTAAGGGTATTAAAGATGACTCTGGCTGGCTC ATTCGGATGGTCGAAAACTTACTTTCTGTTACACGGATTAGTGAAGGTTTGGTAAGCTTAGAACGCGCACCAGAAGCAGT AGAAGAGATTGTTGGTGAAGCAGTTGGTCGTATTAAAAAACGTTTTACAGACCGAACCATTCATGTCAAAGTCCCTCATG ATTTGCTGATGGTTCCAATGGATGGCACGCTAATTGAACAAGTTCTTATTAATTTGATGGAAAATGCGTTGCGACATGCG GGGCCAACCGCGGAAGTTTGGGTAGATGTAACGAAAACGAAAGAAAGTGCAATCTTTAGTATTCGTGATAATGGAAAAGG AATTCCAGAAAAACGTTTGCCGAATTTATTTGATACTTTTGCCGTGGAAGCGAGAGAACGTTCGGATATGTCTCGTGGCT TAGGGCTTGGTTTGTCGATTTGTATGTCCATTATCCGGGCACATGACGGGACTTTGGAAGCCAAAAATAATGAACATGGC GGGGCGACATTTTGGTTCACTTTGCCACTGGATGGAGGAGATGGAAAATGA Protein sequence : METNRPSPDALLVNLQEETDSSVGKLKIYFGFAAGVGKTYAMLSDAKDQLAAGVDVVAGYIEPHAREETLRMLEGIPLIS PKAINHKNIALKEFDLDEALKRKPELILVDELAHTNAAGVRNKKRFQDVEELLQAGIDVYTTVNVQHIESLNDIVEGITK VAVRETIPDYVFDEADRVKLIDIEPDELLKRLEQGKIYRPERAQTAMQNFFTRENLKLLREIAMRKAADRISHEYDQTGV YPEKRASSKWLVCIGTSPSSAKLIRWTARTAEAFRAPWTALYIENEENDYMTKAEKKCLRETMELAERLGAEIVTLAGHD IAETVAEYARLTGVTNIVVGKSRRRMGLRSLFEEDFEDRLITHLDNVDMHIIPSSHPKTKKRRMKMRFKNFLSWHDMAKM VLLLTLATAICVGLSEFGIGDQNVIMVYILSVLIISRVTSGYAYGVLGSIIGVMLFNFFFTSPLYTFNTIQAGYPVTFGI MLLVALITSALTVRIKTQASLAVERERRTEVLYEINKRLLVTRNLKGIIDLTNEYILHLFNRSVVFYSVDPAKSNKGIFM QAEGKEDASALLSPDEEAVAHWVFKNKKRAGAGTDTLMGAFGYYMPVMSQGKVLGVIGVSCSQEEGPLTQDNRIFLRMIS SQVALALERQYLSEEQRQIVIESAKEKMRSNLLRAISHDLRTPLTGIVGASSALLEKETELDKETERNLIKGIKDDSGWL IRMVENLLSVTRISEGLVSLERAPEAVEEIVGEAVGRIKKRFTDRTIHVKVPHDLLMVPMDGTLIEQVLINLMENALRHA GPTAEVWVDVTKTKESAIFSIRDNGKGIPEKRLPNLFDTFAVEARERSDMSRGLGLGLSICMSIIRAHDGTLEAKNNEHG GATFWFTLPLDGGDGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpD | NP_814336.1 | sensor histidine kinase KdpD | Not tested | Not named | Protein | 2e-143 | 41 |
| ef0090 | AAM75293.1 | EF0090 | Not tested | Not named | Protein | 2e-143 | 41 |
