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Name : lwe0235 (lwe0235) Accession : YP_848436.1 Strain : Listeria welshimeri SLCC5334 Genome accession: NC_008555 Putative virulence/resistance : Unknown Product : succinyl-diaminopimelate desuccinylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0624 EC number : - Position : 250990 - 252129 bp Length : 1140 bp Strand : + Note : dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is simi DNA sequence : ATGGATCAACAAAAAAAGATTCAAATTTTAAAGGACATGGTAAATATTGATTCGACTAATGGGCATGAAGAACAGGTTGC GAATTATTTACAGAAGTTGTTAGCTGAATATGGGATTGAATCTGAGAAAGTGCTGTATGATGAAGACAGGGCAAGTCTTG TTAGTGAAATAGGTTCTAGCGATGAGCAAGTTTTGGCTTTTTCAGGGCATATGGATGTGGTTGATGCAGGAGATGTGTCA AAATGGAAGTTTCCTCCTTTTGAAGCAACGGAGCAGGAAGGGAAAATATACGGCCGTGGTGCCACGGATATGAAGTCAGG TTTAGCAGCGATGGTCATTGCAATGATTGAGCTGCAAGAAGAAAAGCAAAAACTAAATGGGAAAATTAGATTATTAGCTA CAGTTGGTGAAGAAGTTGGCGAACTTGGAGCAGAACAACTAACTCAAAAAGGTTATGCAGATGACTTAGATGGTTTAATT ATTGGGGAACCAAGTGGACACCGAATTGTATATGCGCATAAAGGTTCGATTAATTATACCGTTAAATCTACTGGTAAAAA TGCGCATAGTTCGATGCCAGAATATGGTGTGAATGCAATTGATAATTTGATGCTATTTTATAATGAAATAGAAAAATATG TTGCTTCCATCCACACTACAAATGAAATACTAGGTGATTTTATCCATAATGTCACAGTAATAAGTGGTGGAAACCAAGTC AATAGTATCCCAGAAAAAGCAGAACTACAAGGTAATATCCGTTCTATTCCAGAAGTAGATAACGAAACTTTGAAACGGCG AATTGTTGATATTGTAAATGAATTAAATAAAAAAGAACATGTACAGCTAGAGTTAATATTTGATTACGATAAACAACCTG TATTTAGTGACAGAAATTCAAGATTAGTTCATGTTGCGCGTGATGTTGCGAAAGGTATTATCAAGGAAGAGATACCGTTA CTTGGAATTTCTGGAACAACAGATGCAGCCGAGTTTACTAAAGCTAAACATAAGTTCCCAGTAATTATCTTCGGCCCAGG GAATGAAACGCCACATCAAATAAATGAAAATGTCTCCATAGATAATTATTTAGAAATGGTAGATGTATATAAAAAAATTG CAGTAGAATATTTAAGTTAA Protein sequence : MDQQKKIQILKDMVNIDSTNGHEEQVANYLQKLLAEYGIESEKVLYDEDRASLVSEIGSSDEQVLAFSGHMDVVDAGDVS KWKFPPFEATEQEGKIYGRGATDMKSGLAAMVIAMIELQEEKQKLNGKIRLLATVGEEVGELGAEQLTQKGYADDLDGLI IGEPSGHRIVYAHKGSINYTVKSTGKNAHSSMPEYGVNAIDNLMLFYNEIEKYVASIHTTNEILGDFIHNVTVISGGNQV NSIPEKAELQGNIRSIPEVDNETLKRRIVDIVNELNKKEHVQLELIFDYDKQPVFSDRNSRLVHVARDVAKGIIKEEIPL LGISGTTDAAEFTKAKHKFPVIIFGPGNETPHQINENVSIDNYLEMVDVYKKIAVEYLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 3e-159 | 89 |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 1e-157 | 88 |
