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Name : clpB (lwe2223) Accession : YP_850420.1 Strain : Listeria welshimeri SLCC5334 Genome accession: NC_008555 Putative virulence/resistance : Virulence Product : chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2260294 - 2262729 bp Length : 2436 bp Strand : - Note : - DNA sequence : GTGGACTCACTTCAAAAAGTAGTAGACGATAGTTTAAGAAAAATTCCAGTTGTTTCAGGTAGTGATGTTAACTACGGACA AGCAATGAGTGGATCGCTATTTCAATTAATGCGGGATGCGGAAAAAGAACAAAAACAATTAGAAGATGATTTTATATCAA CGGAACATCTTATCCTAGCTGTAATGGACCAGAAGACAAGCCCAATAACAGCTGAACTAAAAAATCAACATAAAGCTAAA AAACAAATTAAAGAAGCAATTTTAAAAATCAGAGGAGGGAAAAAAGTGACTTCTCAAAATGCAGAGGAAAACTATGAAGC TTTAACAAAATATGGACGTGATTTGGTTGCTGAAGTTAGAAGTGGTAAACTCGATCCAGTCATTGGACGCGATGCAGAAA TTCGCAACGTTATCCGAATTTTATCAAGAAAAACAAAAAATAATCCAGTATTAATCGGTGAACCAGGTGTTGGTAAAACT GCGATAGTAGAAGGATTAGCGCAACGAATTGTTAGAAAAGATGTCCCAGAAGGACTAAAAGATAAAACAATTATTTCACT TGATATTGGTTCCCTCATTGCGGGCGCTAAATATCGTGGTGAATTTGAAGAACGTTTAAAAGCAGTACTTCAAGAAGTAA AACAAAGTGAAGGTCAAATCTTACTGTTTATAGATGAAATTCATACGATTGTTGGAGCTGGTAAGACGGACGGTGCGATG GATGCTGGAAACATGTTAAAACCAATGCTTGCCAGAGGAGAACTCCATTGTATTGGCGCAACGACTTTAGATGAATATCG CCAATATATTGAAAAGGATGCTGCTCTTGAAAGACGTTTCCAAAAAGTACTTGTTCCAGAGCCAACAGTGGAAGATACAG TTTCCATTTTACGTGGTTTAAAAGAACGTTTTGAAATTCATCATGGGGTGAATATTCATGATAATGCTCTAGTTGCAGCA GCAAGTCTTTCTAATCGTTATATTACTGATCGTTTTTTACCGGATAAAGCCATTGATTTAGTGGATGAAGCATGTGCAAC AATCCGCGTCGAAATTGATTCTATGCCAAGTGAACTGGATGAAGTGACACGAAAAGTAATGCAGTTAGAAATTGAAGAAG CTGCTTTAAAAGAAGAAAAAGATCCAGCAAGTGAAAGGCGTCTAGAAATGTTACAACGCGAACTAGCTGACTATAAAGAA GAAGCAAATAAAATGAAATCAAAATGGGAATCCGAAAAAAGCGAAATCAGTAAAATTCGCGAAGTCCGGGAACAAATCGA TCATTTACGACATGAATTAGAAGAAGCAGAAAATAACTACGATTTAAATAAAGCTGCAGAACTTCGTCATGGTAAAATCC CAGCTGTTGAAAAAGAATTACTAGCATTAGAAACGGAAAATCGCGAAAAAACAGCACAAGAAGATCGGATTTTACAAGAA GAAGTTACAGAAAATGAAATCGCAGAAATAGTTGGTCGTTGGACAGGTATTCCAGTGACTAAATTAGTAGAAGGCGAACG TGAAAAACTGTTGAAACTAGCAGATGTTCTTCATCAAAAAGTAATCGGTCAAGATGATGCAGTGCAATTAGTTAGTGATG CAGTCCTACGTGCTCGTGCAGGCATCAAAGATCCAAAACGTCCAATCGGTTCTTTTATTTTCTTAGGGCCTACTGGTGTT GGTAAAACAGAATTAGCTAAAGCGCTCGCATATAATATGTTTGATTCTGAAGATCATATGATTCGAATTGATATGTCTGA ATATATGGAGAAACATTCTGTATCAAGACTTGTCGGGGCTCCTCCTGGTTACGTTGGTTATGAAGAAGGCGGACAACTTA CAGAAGCGGTAAGACGCAATCCTTATTCGATTGTCCTACTTGATGAAATCGAAAAAGCGCATCCAGATGTATTTAATATC CTTTTACAAGTGCTCGACGATGGGCGTATTACAGATTCTCAAGGTCGTTTAATTGATTTTAAAAACACGGTAATTATTAT GACTTCCAACATCGGCTCTAATTTATTACTTGAAAGAACCGAAGAAGGAGAGATTTCACCTGAACTAGAATCGGATGTTA TGCAAATTTTACAAAGTGAGTTTAAACCAGAATTTTTGAATCGGGTTGATGATATTATTCTATTTAAACCACTTACACTT GCTGATATTAAAGGTATAGTTGAGAAGTTAGTAGAAGAACTTCAAATTCGCTTAGCAGATCAAGAAATTACTATTACTAT TTCAGATGATGCGAAAGCCTTTATTGCTGAAGAAGCATATGATCCGGTTTATGGTGCACGACCACTTAAACGCTATATTG TGCGTCATGTGGAAACTCCACTTGCCAGAGAAATTGTATCTGGTAAAATCATGCCGCATTCTTCCGTTGAAATAGATTTA CAAGAGAAAGAATTTACTTTTAAAGTCACAGAATAA Protein sequence : MDSLQKVVDDSLRKIPVVSGSDVNYGQAMSGSLFQLMRDAEKEQKQLEDDFISTEHLILAVMDQKTSPITAELKNQHKAK KQIKEAILKIRGGKKVTSQNAEENYEALTKYGRDLVAEVRSGKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKT AIVEGLAQRIVRKDVPEGLKDKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSEGQILLFIDEIHTIVGAGKTDGAM DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGLKERFEIHHGVNIHDNALVAA ASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELDEVTRKVMQLEIEEAALKEEKDPASERRLEMLQRELADYKE EANKMKSKWESEKSEISKIREVREQIDHLRHELEEAENNYDLNKAAELRHGKIPAVEKELLALETENREKTAQEDRILQE EVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADVLHQKVIGQDDAVQLVSDAVLRARAGIKDPKRPIGSFIFLGPTGV GKTELAKALAYNMFDSEDHMIRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNI LLQVLDDGRITDSQGRLIDFKNTVIIMTSNIGSNLLLERTEEGEISPELESDVMQILQSEFKPEFLNRVDDIILFKPLTL ADIKGIVEKLVEELQIRLADQEITITISDDAKAFIAEEAYDPVYGARPLKRYIVRHVETPLAREIVSGKIMPHSSVEIDL QEKEFTFKVTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-105 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_850420.1 | chaperone ClpB | VFG2084 | Protein | 4e-107 | 41 |
