Gene Information

Name : lwe2199 (lwe2199)
Accession : YP_850396.1
Strain : Listeria welshimeri SLCC5334
Genome accession: NC_008555
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2235479 - 2236258 bp
Length : 780 bp
Strand : -
Note : -

DNA sequence : 
ATGGAAGTAAGGGACGTTAGTTTTAGCTATAATGGAACGGATGCAATCTTAAAAAATGTCTCATTTACAATCCAAAAAAA
TAAAATCAATACGATTGTTGGTCCAAATGGTAGTGGAAAATCTACTTTGTTAGAAATTTTAGCGAGGCTTCTTTCGCCTA
GTTCTGGTGAAGTTTTATTAGAAGGAAAATCAATCTTTGAATGGAAAGCGAAAGAATTTGCGCAACAGGTGGCCATTGTC
CATCAAAATAATATACTGCCTAACGAGTTGACAGTGAAGGAGTTGCTCTATTTTGGCAGGCTTCCTTATAAAAATTGGCG
AATGACTCGAACGAAAGCGGATGACCAAGCTGTTAAGTGGGCTTTGGAACAAACCGAGCTGAGTGGAAAAGCAGAGAAAT
TTGTTGATAGTCTTTCTGGCGGAGAGCGACAACGGGTTTTTATTGCGACTGCATTGGTTCAAGACACACCGATTTTGCTC
TTGGATGAACCGACGACATTTCTCGATATGTATTTTCAACTGGAAATTTTAGAATTGATAAAACGGCTAAATCAAAAAGA
AAATTTGACTATCGTGATGATATTGCACGATTTAAACCAAGCATTAACGTATAGTGATCAATTGATTGTTATGAAAAATG
GAGAAGTGATAGCAAAAGGAGAACCAGAAACATTGTTAACGAAAGAACTAATTGCAGAAACTTATGATGTAGTTGCAGAG
GTTTTGAGTAACACAATTACTGGGAAGTATATTATTCCTCAAAGACGAAAGGAAAGTTAA

Protein sequence : 
MEVRDVSFSYNGTDAILKNVSFTIQKNKINTIVGPNGSGKSTLLEILARLLSPSSGEVLLEGKSIFEWKAKEFAQQVAIV
HQNNILPNELTVKELLYFGRLPYKNWRMTRTKADDQAVKWALEQTELSGKAEKFVDSLSGGERQRVFIATALVQDTPILL
LDEPTTFLDMYFQLEILELIKRLNQKENLTIVMILHDLNQALTYSDQLIVMKNGEVIAKGEPETLLTKELIAETYDVVAE
VLSNTITGKYIIPQRRKES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-42 43
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 6e-42 43
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-42 43
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-42 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-43 42
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-44 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-44 42
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-45 42
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-45 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-43 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-43 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-43 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-43 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lwe2199 YP_850396.1 iron ABC transporter ATP-binding protein BAC0164 Protein 8e-44 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lwe2199 YP_850396.1 iron ABC transporter ATP-binding protein VFG1042 Protein 7e-44 42