|
Name : lwe2146 (lwe2146) Accession : YP_850343.1 Strain : Listeria welshimeri SLCC5334 Genome accession: NC_008555 Putative virulence/resistance : Unknown Product : alpha-amylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 2180253 - 2182028 bp Length : 1776 bp Strand : - Note : - DNA sequence : ATGGAAAAAGCAGGGATTTATCATCAACCAGCGAGTAGCTATGCCTATAGTTATGATGCTAAAACACTACATATTCGGAT TAGAACGAAGCGCTTGGATATTAGCGAGGTTACTTTAATTGCTGCCGACCCTTACTTATGGAATGATGGGAAATGGCAAA GTGAATCTTATTCCATGCGCAAAATTGCAGAAACTGAAGAACATGATTATTGGTTTTTTGCAATAACACCTGAACATAGA CGTCTTCAATATGGCTTTTTATTAACAGATACAGACGGAAAGACAATTTTTTATGGGGGTCGTGGATTTTTTGAACCAAC AGAAGCTAATTTAGCTACGATGGATTATTATTTCAAATTTCCATTTATCCATGCGGTAGATACGTTTGAAGCTCCTGAAT GGGTGAGTAACACGATTTGGTATCAAATTTTCCCGGAACGTTTTGCAAATGGAAATCCAGCTATTTCACCAGAAAATGTA TTGCCTTGGGGAAGTAAGGATCCGACACCAACAGATTTCTTTGGTGGAGATATTGAAGGGATTATCGAGCATTTAGATTA CTTAGTGGATCTAGGTATTAACGGGATTTATTTGACCCCTGTTTTTGAGGCGCCAACCAATCATAAGTATGACACAATTG ATTATAAAAAAATTGATCCTCATTTTGGAGACAAAGAAACCTTTAGAAAATTAGTGCAAGAAGCACATAAACGAGGTATT CGAATTATGTTGGATGCAGTTTTTAATCATATTGGTGATACTTCCGCTGAGTGGCAAGATGTGATTGAAAAAGAAGAAAA ATCGGCATATCGCGATTGGTTCCACATTCATAGCTTCCCAGTTCGTCAAAATGAAAATGGTAATATCGAAGGAGAACCAA CGCTTTCCTATGATACATTCGCTTTCACGACACATATGCCAAAATTAAATACTGCTAATCCGGAAGTTCAGAAGTACTTA CTGGACATTGCAACTTATTGGATTCGCGAGTTTGACATTGATGGCTGGCGTTTAGATGTTGCTAATGAAGTTGATCATGC TTTTTGGAAAGAGTTTAAAAAAGCCGTACAAGCGGAAAAAGAAGATATTTATATTTTAGGAGAAATTTGGCATGATTCAT GGATTTGGTTGCTTGGAGATGAATTTCATGCAGTGATGAACTATCCATTTACACAAACAATTATTGAGAATTTTATAGAA GAAAAAATCACACCGGAACAAATGGTTTCGGGTATTAATGAACAATATATGCGCTATCCAAATCAAGTGAATGAAGTAAT GTTTAATATGCTCGATAGCCATGATACCGCTCGTATTTTAACACGCGCCAATAATGATGAGGAAAAAGTGAAACAAGCAC TTGCTTTCATGTTCGCGCATACTGGTTCACCGTGCATTTATTATGGAACAGAAATTGGAATGGACGGCGGAAATGACCCG GGTTGCCGTAAATGTATGGAATGGGATGAAGCGAAACAAAATCAAGCAATGTTAGCTTTTACAAAACAACTAATTGCACT TAGAAAAGACAACCAAGCGATTATCACATCCGGTGAATTAACATGGTTAGATGCAAGTAGTGAAACAGGAATTACTGCAT TTACCAAAGAACTAAATGGGGAAAAATTGCATTTTCTTTTCAATCAAGCGAAAGACAACCAAGATTTCACAATTTCTTTT GAAAAGGAAGCAATGGACATTTGGAATAACCAAGCTGTATCGGAAAATCTTACTATTCCTGCAAAAGGATTTCTTGTTAT TAAAGAGAATAGCTAA Protein sequence : MEKAGIYHQPASSYAYSYDAKTLHIRIRTKRLDISEVTLIAADPYLWNDGKWQSESYSMRKIAETEEHDYWFFAITPEHR RLQYGFLLTDTDGKTIFYGGRGFFEPTEANLATMDYYFKFPFIHAVDTFEAPEWVSNTIWYQIFPERFANGNPAISPENV LPWGSKDPTPTDFFGGDIEGIIEHLDYLVDLGINGIYLTPVFEAPTNHKYDTIDYKKIDPHFGDKETFRKLVQEAHKRGI RIMLDAVFNHIGDTSAEWQDVIEKEEKSAYRDWFHIHSFPVRQNENGNIEGEPTLSYDTFAFTTHMPKLNTANPEVQKYL LDIATYWIREFDIDGWRLDVANEVDHAFWKEFKKAVQAEKEDIYILGEIWHDSWIWLLGDEFHAVMNYPFTQTIIENFIE EKITPEQMVSGINEQYMRYPNQVNEVMFNMLDSHDTARILTRANNDEEKVKQALAFMFAHTGSPCIYYGTEIGMDGGNDP GCRKCMEWDEAKQNQAMLAFTKQLIALRKDNQAIITSGELTWLDASSETGITAFTKELNGEKLHFLFNQAKDNQDFTISF EKEAMDIWNNQAVSENLTIPAKGFLVIKENS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SPN23F_09660 | YP_002510949.1 | alpha-amylase | Not tested | PPI-1 | Protein | 3e-145 | 50 |
