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Name : clpC (lwe0196) Accession : YP_848397.1 Strain : Listeria welshimeri SLCC5334 Genome accession: NC_008555 Putative virulence/resistance : Virulence Product : ClpB ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 207016 - 209478 bp Length : 2463 bp Strand : + Note : - DNA sequence : ATGATGTTTGGACGATTTACGCAAAGAGCTCAGAAAGTACTCGCGTTGTCACAAGAAGAGGCGATGCGTTTGAATCATAG TAATTTAGGGACGGAACACATCCTATTAGGTCTAGTTAGAGAAGGCGAAGGAATTGCGGCGAAAGCTCTTTATGAACTGG GAATTAGTTCTGAAAAAGTGCAACAAGAGGTGGAAGGATTAATTGGTCATGGGGAAAAAGCTGTGACAACCATTCAATAT ACACCGCGAGCAAAAAAAGTAATTGAACTATCTATGGATGAGGCTCGAAAATTAGGGCATACTTATGTTGGTACAGAACA TATTTTACTTGGGCTTATTCGCGAAGGTGAAGGAGTTGCGGCTCGAGTTTTAAGCAACCTTGGTATTAGCTTGAATAAAG CGCGTCAGCAAGTTTTACAGCTTCTAGGTGGCGGAGATGCAACTGGTGCTGGCCGACAAACAAATACACAAGCAACACCG ACTTTGGATAGTTTGGCTCGAGATTTAACGGTTATTGCTCGGGAAGATAATTTGGACCCGGTAATTGGTCGCTCTAAAGA AATTCAACGTGTGATTGAGGTGCTTAGTCGCCGGACGAAAAACAATCCAGTTCTTATTGGGGAACCAGGTGTTGGTAAAA CAGCAATTGCAGAAGGCTTAGCGCAACAAATTGTTCGCAATGAAGTGCCTGAGACCTTGCGAGGAAAACGTGTAATGACA CTTGATATGGGTACTGTTGTTGCTGGTACAAAATATCGTGGTGAATTTGAAGACCGTTTGAAAAAAGTAATGGATGAAAT TCGTCAAGCTGGGAATGTAATTCTATTTATTGATGAACTCCATACTTTAATTGGCGCTGGTGGAGCGGAAGGTGCAATTG ATGCTTCGAATATCTTAAAACCACCTCTAGCTCGTGGTGAATTACAATGTATTGGTGCAACAACACTCGATGAATACCGT AAATACATTGAAAAAGACGCTGCACTTGAAAGACGTTTCCAACCTATTAAAGTAGACGAACCAACTGTGGAAGAATCGAT TCAAATTTTACATGGTTTGCGTGATCGTTATGAAGCGCATCACCGGGTTGCGATTACGGATGAAGCGCTAGAAGCTGCAG TTCGTTTATCAGACCGCTATATTTCAGACCGTTTCTTACCTGATAAAGCAATTGATGTTATTGATGAATCTGGTTCAAAA GTTCGTTTGAAATCTTTTACAACACCAAAAAATGTAAAAGAAATGGAGAACAATTTAACAGATTTGAAAAAAGAAAAAGA TGCGGCTGTGCAAGGACAAGAGTTTGAAAAAGCAGCGGCATTGCGAGATAAAGAACATAAACTCAAAAAATCATTAGAAG AAACTAAAGCTAATTGGCAAGAAAAGCAAGGACTTGATCATAGCGAAGTAACGGAAGATATTGTTGCGGAAGTAGTTGCA AGTTGGACTGGTATCCCAGTTGCAAAACTTGCAGAAACAGAAACAAATAAACTTCTTAATATGGAAAAACTTTTACATGA ACGTGTTATTGGACAAGATGCAGCCGTTAAAGCGGTATCTCTAGCAGTACGACGAGCTCGTGCTGGGCTTAAAGATCCAA AACGTCCAATTGGTTCCTTTATTTTCTTAGGTCCTACAGGTGTTGGTAAAACGGAACTTGCGCGCGCGCTTGCTGAGTCT ATGTTTGGGGATGAGGATTCGATGATTCGGATTGATATGTCCGAATACATGGAAAAATTCTCAACTGCTCGTTTAGTTGG AGCGCCTCCTGGTTATGTTGGTTATGAAGAAGGCGGCCAATTGACAGAAAAAGTTCGTCAAAAACCATATTCTGTAGTGC TGCTTGATGAAATTGAAAAAGCACATCCAGATGTATTTAATATGTTGCTACAAGTGCTTGATGATGGTCGTTTAACTGAT TCTAAAGGTCGTGTGGTTGATTTTAGAAATACAGTTATTATCATGACTTCTAATATCGGTGCTCAAGAAATGAAACAAGA TAAATCAATGGGCTTTAACGTGATTGATCCGCTTAAAGATCATAAGGCAATGGAACATCGCGTTTTACAAGATTTAAAAC AAGCTTTCCGACCGGAATTTATCAACCGGATTGACGAAACAATTGTATTCCATTCCCTACAAGAAAAAGAATTGAAACAA ATTGTTACGCTTCTTACTTCTCAATTAACAAAACGTCTTGCTGAACGTGATATCCATGTGAAATTGACTGAAGGTGCGAA AGCTAAGATTGCTAAAGATGGCTATGATCCTGAATACGGGGCGCGTCCTTTGAAACGAGCTATTCAAAAAGAAGTAGAAG ATATGCTTTCTGAAGAGTTACTTCGTGGAAACATAAAAGTAGGCGACAACGTAGAAATTGGAGTAAAAGAAGGAAAATTA GAAGTTAGAAAAAAAGCTACGCCTAAAAAGAAAGCGGCTCCCAAAAAAGTGAAATCTAAATAA Protein sequence : MMFGRFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQQEVEGLIGHGEKAVTTIQY TPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGDATGAGRQTNTQATP TLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMT LDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATTLDEYR KYIEKDAALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVRLSDRYISDRFLPDKAIDVIDESGSK VRLKSFTTPKNVKEMENNLTDLKKEKDAAVQGQEFEKAAALRDKEHKLKKSLEETKANWQEKQGLDHSEVTEDIVAEVVA SWTGIPVAKLAETETNKLLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAES MFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTD SKGRVVDFRNTVIIMTSNIGAQEMKQDKSMGFNVIDPLKDHKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQ IVTLLTSQLTKRLAERDIHVKLTEGAKAKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIKVGDNVEIGVKEGKL EVRKKATPKKKAAPKKVKSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 58 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-96 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_848397.1 | ClpB ATPase | VFG0079 | Protein | 0.0 | 99 |
| clpC | YP_848397.1 | ClpB ATPase | VFG0080 | Protein | 6e-155 | 52 |
