|
Name : pdp (lwe2013) Accession : YP_850210.1 Strain : Listeria welshimeri SLCC5334 Genome accession: NC_008555 Putative virulence/resistance : Unknown Product : pyrimidine-nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : - Position : 2043095 - 2044396 bp Length : 1302 bp Strand : - Note : Catalyzes the reversible phosphorolysis of pyrimidines in the nucleotide synthesis salvage pathway DNA sequence : ATGAGAATGGTGGATATTATTTCCAAAAAAAGGGACGGCAAAGCTTTATCAACAGAAGAAATTCAGTTTTTCATTGATGG GTATACGAATGGGGAAATTCCAGATTATCAAGCAAGTGCTCTAGCCATGGCGATTTTTTTCCAAGATATGAACGACCAGG AACGCGCAGATTTAACAATGGCGATGGTTGGTTCTGGTGATACGATTGACTTATCTGCAATTGAAGGAATCAAAGTCGAC AAACATAGTACTGGTGGTGTTGGTGATACAACGACACTTGTCCTTGCTCCACTAGTAGCCGCAGTTGGTGTCCCAGTTGC AAAAATGTCTGGCCGAGGTCTTGGTCATACAGGCGGCACCATTGATAAACTAGAATCCATCGAAGGTTTTCATATCGAAC TAGATAAAAAGGATTTCATTGACTTAGTTAATCGCGATAAAGTAGCAGTTATCGGCCAATCAGGAAACCTTACTCCTGCC GACAAAAAAATGTATGCTCTTCGTGATGTAACAGGAACAGTGAACTCCATTCCGCTTATTGCAAGCTCCATTATGAGTAA AAAAATTGCAGCTGGCGCCGATGCAATCGTTCTTGATGTAAAAACAGGTGCAGGTGCATTTATGAAAACGGATGAAGATG CAGAAAACCTAGCACATGCCATGGTTCGCATTGGTAATAATGTTGGTCGTAATACAATGGCAGTCATTTCTGATATGTCT CAACCACTTGGCGAAGCAATCGGTAACGCTTTAGAAGTAAAAGAAGCTATCGATACACTTAAAGGCCAAGGACCAGAAGA TTTAACGGAATTAGTTCTTGTACTTGGTAGCCAAATGGTTGTACTTGCCAAGAAAGCAGCCACTTTAGATGAAGCCCGCA CTAAACTAATGGAAGTAATCGAAAACGGAGCAGCACTTGAAAAATTCAAAACATTCCTTTCTAATCAAGGCGGCGATGCA AGTATTGTCGATCATCCAGAAAAACTTCCACAAGCGAAATACCAAATCGAAGTACCAGCAAAAACATCTGGTTTTGTAAG TCAAATCGTTGCCGATGAAATTGGTATCGCTGCAATGATTTTAGGCGCCGGTCGCGCAACAAAAGAAGACGAAATCAATT TAGCGGTTGGCTTAATGCTACGTAAAAAAGTGGGCGATGCAGTGAAAGAAGGCGAGTCCCTTGTCACCATTTTTGCTGAT CAAGAAGACGTAGAAAATGTGAAAGCAAAAATTTACGAAAACATCCAAATTTCCGCGCACGCAACAGCACCAACACTTGT TCATAAAGTTATTACAGAATAA Protein sequence : MRMVDIISKKRDGKALSTEEIQFFIDGYTNGEIPDYQASALAMAIFFQDMNDQERADLTMAMVGSGDTIDLSAIEGIKVD KHSTGGVGDTTTLVLAPLVAAVGVPVAKMSGRGLGHTGGTIDKLESIEGFHIELDKKDFIDLVNRDKVAVIGQSGNLTPA DKKMYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDVKTGAGAFMKTDEDAENLAHAMVRIGNNVGRNTMAVISDMS QPLGEAIGNALEVKEAIDTLKGQGPEDLTELVLVLGSQMVVLAKKAATLDEARTKLMEVIENGAALEKFKTFLSNQGGDA SIVDHPEKLPQAKYQIEVPAKTSGFVSQIVADEIGIAAMILGAGRATKEDEINLAVGLMLRKKVGDAVKEGESLVTIFAD QEDVENVKAKIYENIQISAHATAPTLVHKVITE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 1e-69 | 47 |
