Gene Information

Name : fhuC (lwe1986)
Accession : YP_850183.1
Strain : Listeria welshimeri SLCC5334
Genome accession: NC_008555
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2014235 - 2015059 bp
Length : 825 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAGACCTTCATACAGAAAACTTACAAATTTCATACGACAAACGAATCATTGTTGATGGTTTAGATATAGCCATTCC
AGCTAATAAGATAACCGCCTTAGTTGGCGCAAACGGTTCTGGGAAATCGACTATTTTAAAAACGATGTCCCGCTTAATGA
AACCTAGTAAAGGTGCTGTTTATTTGGACGGTAAAACGATTCATAATGAACCAACAAGAGAAGTTGCCAAACAATTAGCT
ATTTTGCCACAAAATCCTTCTGCACCTGATGGTTTGACGGTATTTGAATTAATTTCGTATGGTCGTTCTCCTCATCAAAG
TAGTTTTAAATCCATCACTGCAAAAGATCGGGAAATCATTTTCTGGTCATTACGTGTCACTAATTTAACAGAATTTGCCG
ATCGACCAATTGATAGTTTATCAGGTGGACAACGCCAACGAGCTTGGATTGCAATGTCGCTGGCTCAAGAAACAGACGTT
TTATTCCTTGATGAACCAACGACTTTTTTAGATATGACCCATCAACTAGATGTGCTTAATTTATTGAAACAATTAAACCA
ATCAGAAAACCGTACTATCGTTATGGTTGTTCATGATTTAAATCACGCCTCTCGTTACGCACACCATATGATTGCTATTA
AAGAAGGAAAAGTAGTTGCTGAAGGTTCACCAGCTAATGTAATGACCGAACAAACATTAGAAGATGTTTTTAATATCAAA
GCAGATATTTTGATTGATCCACGCAGCGGCGTCCCTCTTTGTCTCCCGTACGAAACTTGTAATGGATGCGAAATTGTAAA
GGAGCTTGATTCCATTGCCAAATGA

Protein sequence : 
MKDLHTENLQISYDKRIIVDGLDIAIPANKITALVGANGSGKSTILKTMSRLMKPSKGAVYLDGKTIHNEPTREVAKQLA
ILPQNPSAPDGLTVFELISYGRSPHQSSFKSITAKDREIIFWSLRVTNLTEFADRPIDSLSGGQRQRAWIAMSLAQETDV
LFLDEPTTFLDMTHQLDVLNLLKQLNQSENRTIVMVVHDLNHASRYAHHMIAIKEGKVVAEGSPANVMTEQTLEDVFNIK
ADILIDPRSGVPLCLPYETCNGCEIVKELDSIAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-58 48
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-58 48
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-54 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-50 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-50 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-50 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-50 45
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-52 44
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-56 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-51 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-51 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-51 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-51 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fhuC YP_850183.1 iron ABC transporter ATP-binding protein BAC0164 Protein 1e-52 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fhuC YP_850183.1 iron ABC transporter ATP-binding protein VFG0925 Protein 3e-57 46
fhuC YP_850183.1 iron ABC transporter ATP-binding protein VFG1042 Protein 1e-52 44