Gene Information

Name : lwe1697 (lwe1697)
Accession : YP_849894.1
Strain : Listeria welshimeri SLCC5334
Genome accession: NC_008555
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 1711319 - 1712491 bp
Length : 1173 bp
Strand : -
Note : catalyzes the formation of L-homocysteine from cystathionine

DNA sequence :
GTGGCTAAAGAATATACACAAGATACTGCTGTGATTAAGGCTAGTCTTGGCGTTGACAAAGAAACCGGTGCGCTGAACAC
ACCAATACATCTATCATCCACCTTCCATCAGCATGATTTTGATAACTATCATGCCTATGATTATGCGAGAAGTGGTAATC
CAACGAGAGAAAAAGTGGAACAAGCGATTGCAGAGTTAGAAGGTGGCACTGACGGCTTTGCTTTTGCAAGCGGGATGGCT
GCTGTATCTGCGGCGTTATTCACACTTTCTAAAGGGGATCATTTTATTATTGCTAAAGATGTGTATGGCGGTACATTTCG
CTTAGTGGAGCAAATTTTGCCACGGTTTGGTATTACACATACGTTTGTGGATACAACAAATATTGATGAGGTTGCAAAGG
CTTTTCAAGAAAATACCAAGTTGGTTTATTTAGAAACTCCGTCTAATCCATTGTTACATGTAACAGATATTCGGACAGTG
GCAAAGCTTGCGAAAGCGAACGGTTGCTATACGTTTGTGGATAATACCTTTTTAACACCACTAATTCAAAAACCTTTAGA
ATTAGGTGCGGACTTAGTCATTCATAGTGCGACGAAGTTTTTAGGGGGGCATAGTGATATTTTAGCGGGACTTATTGTCA
CAAACAATCCTAGCTTGGCTGAATCGGTTTACTTTTTACAAAATTCGACAGGGGGAGTTCTTGGGGTACAGGATTCGTGG
TTGCTACTGCGTGGACTTAAAACACTTTCGGTTCGAATGAAAGCTGGGACGTCAACCGCAGAAAAAATAGCGCTCTTTTT
GAAGGCGGAACCTAGTGTAGAAGCAGTACATTATCCAGGACTACCATCTCATGCAGGTTATGAAATTCAAGTGGAGCAAG
CGACAAGTGGCGGGGCTGTATTGTCTTTTGATCTTGGTAGTGAGGATGCTGTACGTGAACTAGTGACACATTTGGAATTG
CCGGTATTTTCTGTAAGTTTAGGGGCAGTAGAGAGTATTATATCTTACCCGGCCAAAATGTCTCATGCTGCAGTTCCAGA
AAAGGAACGTTTGGAACAAGGAATTACACCAGGTTTATTACGTTTTTCAGCAGGATTGGAAGATGCTGATGATTTAATTG
CTGATTTAAAACAAGCACTTTCGTTTATTAAGAAGGGAAGTGTCGTCAAGTGA

Protein sequence :
MAKEYTQDTAVIKASLGVDKETGALNTPIHLSSTFHQHDFDNYHAYDYARSGNPTREKVEQAIAELEGGTDGFAFASGMA
AVSAALFTLSKGDHFIIAKDVYGGTFRLVEQILPRFGITHTFVDTTNIDEVAKAFQENTKLVYLETPSNPLLHVTDIRTV
AKLAKANGCYTFVDNTFLTPLIQKPLELGADLVIHSATKFLGGHSDILAGLIVTNNPSLAESVYFLQNSTGGVLGVQDSW
LLLRGLKTLSVRMKAGTSTAEKIALFLKAEPSVEAVHYPGLPSHAGYEIQVEQATSGGAVLSFDLGSEDAVRELVTHLEL
PVFSVSLGAVESIISYPAKMSHAAVPEKERLEQGITPGLLRFSAGLEDADDLIADLKQALSFIKKGSVVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-76 48
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-75 47
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 5e-74 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lwe1697 YP_849894.1 cystathionine beta-lyase BAC0207 Protein 7e-55 43