Gene Information

Name : lwe0163 (lwe0163)
Accession : YP_848364.1
Strain : Listeria welshimeri SLCC5334
Genome accession: NC_008555
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 162658 - 163350 bp
Length : 693 bp
Strand : +
Note : -

DNA sequence : 
ATGCCAAAACCGCTAATTGACATGAAAAATTTAACAAAAACTTATACGCTAGGCGGAGAAACTTTTAAAGCATTAGACGA
TGTTACTTTTACCGTTGAAAAAGGGGAGTTCCTATCCATCGTTGGTCCGTCCGGTTCCGGTAAATCAACTTTAATGAATA
TGATTGGTTGTTTGGATGTTCCAGATGAAGGTAGTTATCACCTTGATGATGTAGATGTGTTTAAACTAAGCGACAATAAA
TTATCCGAAATCAGAAATAAGAAAATCGGCTTTATTTTTCAGCAGTTTAATTTGCTTCCTAAATTATCTGCTTTTGAAAA
TATAGAGTTGCCATTAATTTACGCTGGACTGAGTGTTTCTGCACGCGAAAAAGCTGCTCTTGAATGCTTGGAAAAAGTTG
GTCTGATTGAAAAGCGTAGAAATTTACCAACTCAGCTATCTGGTGGACAACAACAACGTGTAGCAATCGCGCGTGCCCTT
GCTGGTAATCCGCAAATTCTTTTAGCAGATGAGCCAACGGGAGCCCTTGATTCCAAAACAGGTAAGGAAGTAATGGGAAT
CTTACAAGAGTTGAATCGAGCAGGAAATACAATTGTTATGATTACACATGATCCGACAATTGCCTCTTATGGAACAAGAA
GCATTCGAATTCAAGATGGTAAATTATTCCATGAGGAGGCGACAAAAGCATGA

Protein sequence : 
MPKPLIDMKNLTKTYTLGGETFKALDDVTFTVEKGEFLSIVGPSGSGKSTLMNMIGCLDVPDEGSYHLDDVDVFKLSDNK
LSEIRNKKIGFIFQQFNLLPKLSAFENIELPLIYAGLSVSAREKAALECLEKVGLIEKRRNLPTQLSGGQQQRVAIARAL
AGNPQILLADEPTGALDSKTGKEVMGILQELNRAGNTIVMITHDPTIASYGTRSIRIQDGKLFHEEATKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-31 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lwe0163 YP_848364.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 8e-61 56
lwe0163 YP_848364.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 8e-45 50
lwe0163 YP_848364.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-43 49
lwe0163 YP_848364.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-45 46
lwe0163 YP_848364.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 1e-37 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lwe0163 YP_848364.1 ABC transporter ATP-binding protein VFG0869 Protein 3e-21 45