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Name : polA (lwe1578) Accession : YP_849775.1 Strain : Listeria welshimeri SLCC5334 Genome accession: NC_008555 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : - Position : 1579261 - 1581888 bp Length : 2628 bp Strand : - Note : has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair DNA sequence : GTGAATAAATTAGTATTAATTGATGGAAACAGTATTGCGAATCGCGCGTTTTATGCGTTACCGCTTTTAAATAACGATAA AGGCGTCTATACAAATGCAGTGTATGGATTTGCAATGATGTTGATGAATGTACTCGAAAAAGAAAAGCCTAGCCATGTAC TGGTTGCTTTTGATGCCGGAAAAACCACATTCCGCCATACAACTTTTAAAGGCTACAAAGGTGGTCGTCAAAAAACGCCA AGTGAGCTATCTGAACAATTTCCATTTATTCGAGAGCTTTTAACTGCTTACGATATCCCACAATATGAACTTGCTAATTA TGAAGCAGATGATATTATCGGAACATTAACGAAACAAGCAGAAGCAGATGGGTTGGAAGTAGCCATCATTACTGGGGATC GTGATTTAACGCAATTAGCTTCAGAAAAAACCACCGTTTATATAACTAAAAAAGGTATAGCGGATATGGAAACAAATACA CCAGAAACTTTAAAAGAAAAATACAATTTAACACCAACACAAATCATTGATATGAAGGGCTTAATGGGCGATTCATCTGA TAATATTCCTGGTATCCCTGGTGTAGGTGAAAAGACAGCGTTGAAACTACTCCATGAATTTGGTGGAACAGTGGAAAGCG TACTAGAACATGCCGAAGAAATTTCTGGTAAAAAATTAAAAGAAAAAGTACTAGAAAACAAGGAATTAGCTGTTTTAAGT AAAGAATTAGCCACAATTAATGTGAATTCCCCAATCGAATGCACAGTCGAAAGTACGAAATACGACGGCTATCAAACAGA AAAAGTCATTCCATTATTAAAAGAAATGAATTTTACAACCCTTTTGAAAAATATCGAAGGTGGCGCACCAGAAGAAGTGA AAGAACTAAAAGAATTATCTTATGAAATAGTAACCGAATTAAAAGAAAAACATTTTGGTGGGAAAACGGCGCTTTATGTA GAATTAGAAAATGATAATTACCATACAGCGAACTTCATCGGGCTGGCGATTCATTCTGATCAAGGAACCTATTTCTTTAC AAAAGAAACTGCGGAAAATAGCGTATCGTTCCGGGAATGGGTGGAAAGTGCTCAAACGAAAGTAGTGTATGATGCGAAGA AAACAATGGTAGCAATGAACAGAATGGGATTTGCTATTTCAGGAATCACATTCGATATTATGTTAGCTTCCTACTTGCTA AACCCTTCTGATTCCATTGATGACTTTACAAGTGTAGCAGTGCGACATGATTATACCGAAGTAGAAACAGACGAAGCAGT TTATGGCAAAGGGGCAAAAAGAAGTACACCAGAAGAAAGCATTGTTGCGGGACATTTAGCTAGAAAAGCGGTAGCAATTG CAGAATTAGAGAAAAGACTGGTAGATGATTTAGAGAAAAATGAGCAATTAGCTTTGATGGAAGACTTAGAGTTGCCACTG ACATTTGTTTTAGCGCAAATGGAAATGCAAGGGGTTAGTGTAGATACAGAACGTCTTGAAAATATGAAAGTAGAACTAGC TGGCCGTTTAAAAACATTAGAAACGTCTATTCATTCACTTGCAGGGGAAGAATTTAACATCAATTCACCAAAACAATTAG GTGTCATTTTATTTGAAAAGCTAGAACTACCTCCAGTGAAGAAAACTAAAACAGGTTATTCAACAGCGGCAGATGTGTTA GAAAGCTTATCTGGAAAACATGACATTATTGATGAAATCTTGTTATACCGTCAACTTGGTAAGATTCAGTCTACTTATAT TGAAGGATTACTTAAAGTTACTGACAAAGAAACACATAAAGTTCATACACGTTTTAACCAAACACTAACACAGACTGGTC GCTTAAGTTCGGTTGATCCAAACCTTCAAAACATTCCAATTCGACTTGAGGAAGGACGGAAGATTAGACAAGTGTTTGTG CCAAGTAAACCAGGTTGGAAAATATTTTCTGCCGATTATTCTCAAGTAGAATTGCGAGTTTTGGCGCATATTTCAGAAGA CGAAAACCTAATTTATGCGTTCAAACATGATTATGATATTCATACTAAAACAGCAATGGACGTTTTTCATGTGGAGCAAG AAGAAGTAGACTCTTTAATGCGTCGTCAAGCCAAGGCAGTTAACTTTGGTATAGTGTATGGTATTAGTGATTATGGCCTA TCTCAAAACCTTGGTATTACTCGAAAAGATGCCAAAGATTTTATTGATCGTTATTTTGTGAGTTATCCAGCCGTGAAAGA ATATATGCACGATATCGTCCGTTTTGCGAAAGAAAAAGGTTATGTAGAGACCATTTTACATCGTCGTCGCTATATTCCGG AAATCGTCAGCCGTAATTTTAATGTTCGAGGATTTGCTGAAAGAACCGCAATGAATACGCCAATTCAAGGTAGTGCCGCC GATATAATCAAAAAAGCGATGATTCTTATGAGTGAACGCTTAGAATCTGAACAATTAGAAGCAAAATTATTGCTTCAAGT GCACGATGAACTAATTTTTGAAGCACCTGAAGCTGAGATAGCTAAATTAGAAGAGATTGTACCAGATGTTATGGAAAATG CAGTGGAACTTTCTGTACCACTTAAAGTGGATAGTGCATTCGGTGACACATGGTATGACGCGAAATAA Protein sequence : MNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAGKTTFRHTTFKGYKGGRQKTP SELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKQAEADGLEVAIITGDRDLTQLASEKTTVYITKKGIADMETNT PETLKEKYNLTPTQIIDMKGLMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKVLENKELAVLS KELATINVNSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGGAPEEVKELKELSYEIVTELKEKHFGGKTALYV ELENDNYHTANFIGLAIHSDQGTYFFTKETAENSVSFREWVESAQTKVVYDAKKTMVAMNRMGFAISGITFDIMLASYLL NPSDSIDDFTSVAVRHDYTEVETDEAVYGKGAKRSTPEESIVAGHLARKAVAIAELEKRLVDDLEKNEQLALMEDLELPL TFVLAQMEMQGVSVDTERLENMKVELAGRLKTLETSIHSLAGEEFNINSPKQLGVILFEKLELPPVKKTKTGYSTAADVL ESLSGKHDIIDEILLYRQLGKIQSTYIEGLLKVTDKETHKVHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFV PSKPGWKIFSADYSQVELRVLAHISEDENLIYAFKHDYDIHTKTAMDVFHVEQEEVDSLMRRQAKAVNFGIVYGISDYGL SQNLGITRKDAKDFIDRYFVSYPAVKEYMHDIVRFAKEKGYVETILHRRRYIPEIVSRNFNVRGFAERTAMNTPIQGSAA DIIKKAMILMSERLESEQLEAKLLLQVHDELIFEAPEAEIAKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 50 |
