Gene Information

Name : hemC (lwe1569)
Accession : YP_849766.1
Strain : Listeria welshimeri SLCC5334
Genome accession: NC_008555
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 1569594 - 1570523 bp
Length : 930 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGAAAAGGAAAATAATTGTTGGTTCCAGACGAAGTAAATTAGCTTTAACACAATCTAATTGGGTGATTAATAAACTCAA
AGAACAATATCCAGAATTTGACTTTGAAATAAAAGAAATCGTTACAAAAGGAGATCGCATTTTAGATGTGACGCTTAGCA
AAGTAGGTGGTAAGGGTTTATTCGTATCGGAAGTGGAGCAAGCTTTGAGTAACAGTACAATTGATTTTGCGGTACATAGT
ATGAAAGATGTTCCTTCTAGTTTGGAAGAAGGACTAGTCATTGGTGCTATTCCTAAACGCGAATCGCCACTAGACTGTTT
TGTTTTTAATCAAGTTAGTTCACTTGATGATTTGCCAAAAGGAGCAATTGTTGGTACAAGTAGTCTACGCCGGGCAGCCC
AACTTTTAAAACATCGTCCTGATTTTAACATTAGACCAATCCGCGGAAACATTGATACTCGCCTTCAAAAATTGCATGTC
GAAAATTTTGATGCGATCATTTTGGCTAAAGCTGGACTAGCTCGAATGGGATGGTTAGAAAATACCACATTAAAACTAGA
AGATATTGCACCCGAAGTATGTTTGCCAGCGGTTGGACAAGGAGCGCTTGCGATTGAGTGTCGAGAGAGTGACCAGTTAA
TTCGAGATATGTTAGCGACGATCCATCATGAAGAAACAGGTATCTGTGTAGAAGCAGAGCGAGTTTTTTTAAAAAAATTA
AATGGTGGCTGCGAAATCCCGATTGCTGGATTTGCTACTAAGATAGGTGAGCAAATTCATTTTAAAGGGCTGGTTGGAAA
TGCAGATGGTTCTAAAATTCTTGAATCAAAAGAAATTGGAGAAAATCCGGGTCAAATAGGAAATAAAGTAGCAGAAGTTT
TGCTAAGTGAAGGCGCAGAAACAATTATTGAAGAGTTGAGAAATAAATGA

Protein sequence :
MKRKIIVGSRRSKLALTQSNWVINKLKEQYPEFDFEIKEIVTKGDRILDVTLSKVGGKGLFVSEVEQALSNSTIDFAVHS
MKDVPSSLEEGLVIGAIPKRESPLDCFVFNQVSSLDDLPKGAIVGTSSLRRAAQLLKHRPDFNIRPIRGNIDTRLQKLHV
ENFDAIILAKAGLARMGWLENTTLKLEDIAPEVCLPAVGQGALAIECRESDQLIRDMLATIHHEETGICVEAERVFLKKL
NGGCEIPIAGFATKIGEQIHFKGLVGNADGSKILESKEIGENPGQIGNKVAEVLLSEGAETIIEELRNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-62 49
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-62 49