Gene Information

Name : lwe1520 (lwe1520)
Accession : YP_849717.1
Strain : Listeria welshimeri SLCC5334
Genome accession: NC_008555
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1515236 - 1515922 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGAAACTACTGATGATAGAAGATAATGTGAGTGTTTGTGAAATGATAGAAATGTTCTTTATGAAAGAAGAAATTGATGC
AACGTTTGTGCACGATGGCAAACTTGGCTTTGAAACATTTTTTAAAGATGATTTTGATATTGCGATTATTGATTTAATGT
TGCCAAATATGGATGGCATGACTATTTGCAGGAAAATACGTGAAGTCAGCGATGTTCCTATCATTATTTTAACAGCGAAA
GAATCAGAATCAGACCAGGTACTTGGACTTGAAATGGGTGCGGATGATTATGTAACAAAACCATTTAGCCCACTTACTTT
AATGGCTCGAATCAAAGCTGTCACTCGTCGGAAAAATAATAGTTCTTCCAATGAAAACGAGGAAGATATTTTAGAAACAA
ACTATTTTAAAATCAGTAAACGTACTCGCGAAATTTTTTATCAAGGAAAGCTTTTAGATGCTTTAACACCAAAAGAATTT
GATTTACTTTACTTTTTAATGCAGCATCCACGTCAAGTTTTTTCAAGAGAACAATTACTGGAGCAAGTTTGGGGTTATCA
ATTTTATGGAGATGAGCGTACTGTGGATGTTCATATTAAACGTTTACGCCAAAAAATTGCCACAGATACGAAGCCGTTTT
TACACACTGTTTGGGGTGTGGGCTACAAATTTGATGAAACGGAATGA

Protein sequence : 
MKLLMIEDNVSVCEMIEMFFMKEEIDATFVHDGKLGFETFFKDDFDIAIIDLMLPNMDGMTICRKIREVSDVPIIILTAK
ESESDQVLGLEMGADDYVTKPFSPLTLMARIKAVTRRKNNSSSNENEEDILETNYFKISKRTREIFYQGKLLDALTPKEF
DLLYFLMQHPRQVFSREQLLEQVWGYQFYGDERTVDVHIKRLRQKIATDTKPFLHTVWGVGYKFDETE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-32 49
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-32 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lwe1520 YP_849717.1 DNA-binding response regulator NC_012469.1.7686381. Protein 2e-36 46
lwe1520 YP_849717.1 DNA-binding response regulator CP001918.1.gene3444. Protein 1e-27 45
lwe1520 YP_849717.1 DNA-binding response regulator DQ212986.1.gene4.p01 Protein 4e-28 44
lwe1520 YP_849717.1 DNA-binding response regulator AM180355.1.gene1830. Protein 2e-28 44
lwe1520 YP_849717.1 DNA-binding response regulator BAC0039 Protein 6e-27 44
lwe1520 YP_849717.1 DNA-binding response regulator NC_002695.1.916589.p Protein 6e-27 44
lwe1520 YP_849717.1 DNA-binding response regulator CP000034.1.gene2186. Protein 6e-27 44
lwe1520 YP_849717.1 DNA-binding response regulator CP000647.1.gene2531. Protein 6e-27 44
lwe1520 YP_849717.1 DNA-binding response regulator BAC0596 Protein 4e-25 44
lwe1520 YP_849717.1 DNA-binding response regulator CP001138.1.gene2239. Protein 4e-25 44
lwe1520 YP_849717.1 DNA-binding response regulator NC_012469.1.7685629. Protein 6e-33 43
lwe1520 YP_849717.1 DNA-binding response regulator AE016830.1.gene1681. Protein 9e-34 43
lwe1520 YP_849717.1 DNA-binding response regulator FJ349556.1.orf0.gene Protein 2e-33 43
lwe1520 YP_849717.1 DNA-binding response regulator NC_002952.2859858.p0 Protein 6e-29 43
lwe1520 YP_849717.1 DNA-binding response regulator NC_007622.3794948.p0 Protein 6e-29 43
lwe1520 YP_849717.1 DNA-binding response regulator NC_003923.1003417.p0 Protein 6e-29 43
lwe1520 YP_849717.1 DNA-binding response regulator NC_013450.8614146.p0 Protein 6e-29 43
lwe1520 YP_849717.1 DNA-binding response regulator NC_002951.3238224.p0 Protein 6e-29 43
lwe1520 YP_849717.1 DNA-binding response regulator NC_007793.3914065.p0 Protein 6e-29 43
lwe1520 YP_849717.1 DNA-binding response regulator NC_002758.1121390.p0 Protein 6e-29 43
lwe1520 YP_849717.1 DNA-binding response regulator NC_010079.5776364.p0 Protein 6e-29 43
lwe1520 YP_849717.1 DNA-binding response regulator NC_005054.2598277.p0 Protein 2e-30 43
lwe1520 YP_849717.1 DNA-binding response regulator AF155139.2.orf0.gene Protein 2e-31 43
lwe1520 YP_849717.1 DNA-binding response regulator NC_014475.1.orf0.gen Protein 2e-30 43
lwe1520 YP_849717.1 DNA-binding response regulator CP000034.1.gene3671. Protein 5e-32 43
lwe1520 YP_849717.1 DNA-binding response regulator NC_010400.5986590.p0 Protein 2e-33 42
lwe1520 YP_849717.1 DNA-binding response regulator NC_010410.6002989.p0 Protein 1e-33 42
lwe1520 YP_849717.1 DNA-binding response regulator NC_011595.7057856.p0 Protein 1e-33 42
lwe1520 YP_849717.1 DNA-binding response regulator HE999704.1.gene2815. Protein 2e-38 42
lwe1520 YP_849717.1 DNA-binding response regulator AF130997.1.orf0.gene Protein 3e-26 42
lwe1520 YP_849717.1 DNA-binding response regulator AE015929.1.gene1106. Protein 1e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lwe1520 YP_849717.1 DNA-binding response regulator VFG1563 Protein 9e-33 49
lwe1520 YP_849717.1 DNA-binding response regulator VFG1702 Protein 2e-32 49
lwe1520 YP_849717.1 DNA-binding response regulator VFG1389 Protein 5e-25 41