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Name : lwe1273 (lwe1273) Accession : YP_849470.1 Strain : Listeria welshimeri SLCC5334 Genome accession: NC_008555 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 1262494 - 1264140 bp Length : 1647 bp Strand : - Note : - DNA sequence : ATGACAACTTTTGCTCAAAAAACAATTTATCAAGTGTATCCAAAATCATTTTATGATACAACAGGCGATGGTACTGGGGA CATTCCTGGTATCACTGCCAAGCTTGATTATTTGCACAAACTAGGAATTGAGATGATTTGGATTAATCCATTTTATCCTT CTCCACAAAATGATAATGGTTATGATATTTCTGATTATACAGCTGTTGATCCACTATTTGGAACAATGGAAGATGTTATT ACCCTTATTACCGAGGCGAAAAAAAGAAATATTGGCATTATGATTGATTTAGTATTAAATCATACTTCTACAGAACATCC TTGGTTTAAAAAAGCGCTTGCTGGAGATCCGTTTTATCGTGATTTTTATTATTTCCGCCAAGCAAAAGCAGATGGTTCTC CCCCAACCAATTGGGAGTCTAAATTTGGTGGCAGTGCCTGGGAAAAATTACCAAATTCATCAGAGTATTACCTGCATTTG TATGATGTCACTCAAGCAGATCTAGACTGGGCCAATCCAAATGTCCGCGCTGCACTCTTTGATGTAGTGAATTTTTGGAT CGATAAAGGGGTGGAAGGTTTTCGTTTAGATGTTTTAAATGTAATTGCGAAACCCAAATTTTTAGAAGATGATTTTGAAG GTGATGGGCGTCGTTTCTATACTGATGGACCAGGAATCCATGCTTATTTAAAAGAGCTAAATGAACGAACATTTGGGGAT AAGCCAATTATTACTGTAGGTGAAATGTCCTCGACAGATATTGACAACTGCATTCGCTATAGTAACCCTGATGAAAAAGA ATTATCAATGGTATTTCATTTCCATCATTTAAAAGTAGATTATCCAGATGGGGAAAAATGGCGTTTAGCAGATGTGAATT TTGCGGATTTAAAATCTATTTTCCATACTTGGCAAGTTGCAATGTCTAAAGAAAATGGTTGGGATGCGCTTTTCTGGAAT AATCATGATCAGCCAAGAGCACTTGGACGTTTTGCTTCTGATCAACCAGAACATTATTATCAATCAGCTACCCTACTTGG AGCAACCATTCATTTTATGCGAGGAACACCATTTGTTTATATGGGGGAAGAAATTGGTATGATGAATCCAAAATTCCCAA CAATTAATCATTACGTGGATGTTGAAACACTTAATCATTTTGACATTTTACAAAAACAAGGGCTTTCTGAAGAAGAAGTG ATGCAAATTATTAAAGAACGTTCGCGAGATAATAGTCGTACACCTATGCAATGGAATCATTCAGAAAATGCAGGATTTAC AACTGGTACTCCTTGGCTAAAAGTAGCTGATAACGCAGATAAAATTAATGTTCAAGATGTATTAGCAGACAAAACAAGCA TTTTCTACTTTTATCAAAAATTAATTGCTTTACGTAAAGAGCACCCGGTTATCCAAACTGGTGATTATACGCCTTACTTT ACAGAAGAAGATTCCATTATCGCTTATAAACGTTCAAATGAATCCTCTTCCCTACTTTCTATTCATTATTATGGTGCTAC AGAAAAAAAATTACAAATTCCAAGTGAATTTTCTAATGCCAAAGTGTTACTATCTAATCATGAGCGTACAGAAATTAGTT CTGAAATCGAATTAGCTCCCTATGAAACATTGACGTTAATACAATAA Protein sequence : MTTFAQKTIYQVYPKSFYDTTGDGTGDIPGITAKLDYLHKLGIEMIWINPFYPSPQNDNGYDISDYTAVDPLFGTMEDVI TLITEAKKRNIGIMIDLVLNHTSTEHPWFKKALAGDPFYRDFYYFRQAKADGSPPTNWESKFGGSAWEKLPNSSEYYLHL YDVTQADLDWANPNVRAALFDVVNFWIDKGVEGFRLDVLNVIAKPKFLEDDFEGDGRRFYTDGPGIHAYLKELNERTFGD KPIITVGEMSSTDIDNCIRYSNPDEKELSMVFHFHHLKVDYPDGEKWRLADVNFADLKSIFHTWQVAMSKENGWDALFWN NHDQPRALGRFASDQPEHYYQSATLLGATIHFMRGTPFVYMGEEIGMMNPKFPTINHYVDVETLNHFDILQKQGLSEEEV MQIIKERSRDNSRTPMQWNHSENAGFTTGTPWLKVADNADKINVQDVLADKTSIFYFYQKLIALRKEHPVIQTGDYTPYF TEEDSIIAYKRSNESSSLLSIHYYGATEKKLQIPSEFSNAKVLLSNHERTEISSEIELAPYETLTLIQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 8e-106 | 42 |
