|
Name : lwe1216 (lwe1216) Accession : YP_849413.1 Strain : Listeria welshimeri SLCC5334 Genome accession: NC_008555 Putative virulence/resistance : Unknown Product : phage-related DNA primase/helicase Function : - COG functional category : S : Function unknown COG ID : COG4983 EC number : - Position : 1220799 - 1223141 bp Length : 2343 bp Strand : + Note : - DNA sequence : GTGTATGAACAAATTCCAGACGAATTAAAAAAATTAAAGCAATGGTGCGCTTTTCAACTGGTTTGGGATGAAGAGCGTGG CAAAAATAAAAAGATACCAATGAACGCAAATACTGGAGCATATGGCAATAGTGTAGACGAGCGAACTTGGGCAGATTTTG AAACTGCCCTTGCTTCACTCGAAAAGTATCAATTCGATGGGTTAGGATTTTACTTCAAGGCGCCGTATTTTGGCGTGGAT ATAGACGACATAAAAGACGATATTCAAGATTATTTATATGGAAATACTGAAAATATTGCTGGTGAGTTTATTCAAACGTT AGCTAGCTACACTGAGTACAGTGTGAGTGGGACAGGTATTCATATTATTGCAAAAGGCGATTTTCCGGAAGGTGGTCGGC GCAAAGGTAATATTGAAATGTATCCGGATGGTCGGTTTTTCGTTATGACGGGTCAAGTAATTGATAACTACAGACAAGTC AATGAAGCGACATCAGCAATAAAAATACTGCATGAGAAATACATCGGAACAATTGAAAACACATCACTAACTAAGCATCA AAATTCATCAAATGATTTGTCTGAAAGTGAAATATTGGAAAAAGCATATAATAGCCAAAATGGTCCATACTTTAAAACAT TGTACGAGGGAAATTGGGAAGCATATTACGCTTCGCAGTCAGATGCAGATCTAGCTTTTGCAAATATGTTAGCTTTTTGG ACAGCAGCAGATTATGACAAAATGGATACTATTTTCCGAGATTCAGGGTTGATGCGTGATAAATGGGACCAAAAACGAGG GCAAAACACTTATGGACAAATAACATTAGGTAAAGCTATATCAGGTTGTTCAGAAGTTTACTCGCCTAAACAGAGTGGCA ACAGTTACAATATCAACTTAAAGTCGCGTAAAAATTGGGCGCAATTATTAAATGAAAGACGTAAAAAAGAATTAGAAAAG CTAAAAGAAGAATGGTTAATAAGTGGTGGGAAAGGAAAACAACCGAGCGTTATATCACCAATTGGTTGCGCTATTATATT GAAAGAATTCTTCCGTTTCTGCTTATTTAATATGAATGAAAACACTCGATTAGCTATGTATTTAGAAGAAGATGGCATTT GGACACAAAATGAGACTTACATTCGACGTTTTATCGGATTTTTAGAACCAACACTAAATGCAAATAAAGCGAGTGATGTT ATTTATCATTTGTGGAAAGGTGCCGAAGTAAAAGAAAAAACAGTATCAAAGTATCTTATACCAGTTAAAAACGGTGTATT CAATCTTAAAACAAAGAAATTAGAAGCCTTCACGCCTGATTATGTATTCACTTCCAAAATAGCTACGCCATATGTTGCAA ATCCACCGAAACAAAACATAAATGGGTGGGATGTTCATACATGGCTGGATGAAATAGCATGTGGTGATGAACAAATAACA TCACTGTTGTGGCAAGTTATCAGCGCATCCTTGAACGGAAATTATTCACGAAAAAGTTCTATTTGGTTGCTAGGAGATGG AAATAACGGTAAAGGGACTTTTCAACAGTTATTGCGTAATTTAATCGGAAATTCTAATATTGCAACACTAAAATTACCGC AATTTCAAGAACGTTTTTCCTTATCAATTTTAGAAGAAAAAGTATGTTGCATCGGTGACGATGTCCCAGCTGGTGTGTAT ATTGATGATTCTTCCAATTTTAATTCTGTTGTAACAGGTGATGAAATTATGGTGGAGCAAAAAAACAAACACCCATATAG CGCAAATTTTCATATGACAGTGATTCAGTCCACTAATGGTATGCCTAAAATGCGTAATAAAACAGATGGAACATATCGCC GTTTTATTATCGTTCCATTTAAAGCTAATTTAAAAGGTGGAAAAGACAATTGGAAGATTAAAGATGAATATATACAGAAT AAAGAAGTATTACAATATATTTTATTTCATGCAATCAATATGGATTTTGAACGATTTGTTGAACCAGATGTATCAAAAAA AATCATGGAGGAATATAAACTAGATAACGACCCGATTTTAGATTATTACGAACGTATTTTTAAAGAATATAAAAGTACTA GAATTCCGCTTTATGTTGTCTACGAGTTTTACAAGTATTTTTGCGAATCAAATAATTTAAAACCAGTTGGCGATCGCTCG TTTTATAAACGTTTTGGTGAAATTCTTTCAGAAGAAGGTTGGGAAAAAGGTAAACATAAGTTAAGCGGTAAGTTTGACCC TGCAGATACTCCAACAGGAATACATCCTTACCGTTACCAACAACCAAAGGATTCCGTCACTTATGTGTGTTTCATAAAAA ATAATACATTGAAAGTTGTTTGA Protein sequence : MYEQIPDELKKLKQWCAFQLVWDEERGKNKKIPMNANTGAYGNSVDERTWADFETALASLEKYQFDGLGFYFKAPYFGVD IDDIKDDIQDYLYGNTENIAGEFIQTLASYTEYSVSGTGIHIIAKGDFPEGGRRKGNIEMYPDGRFFVMTGQVIDNYRQV NEATSAIKILHEKYIGTIENTSLTKHQNSSNDLSESEILEKAYNSQNGPYFKTLYEGNWEAYYASQSDADLAFANMLAFW TAADYDKMDTIFRDSGLMRDKWDQKRGQNTYGQITLGKAISGCSEVYSPKQSGNSYNINLKSRKNWAQLLNERRKKELEK LKEEWLISGGKGKQPSVISPIGCAIILKEFFRFCLFNMNENTRLAMYLEEDGIWTQNETYIRRFIGFLEPTLNANKASDV IYHLWKGAEVKEKTVSKYLIPVKNGVFNLKTKKLEAFTPDYVFTSKIATPYVANPPKQNINGWDVHTWLDEIACGDEQIT SLLWQVISASLNGNYSRKSSIWLLGDGNNGKGTFQQLLRNLIGNSNIATLKLPQFQERFSLSILEEKVCCIGDDVPAGVY IDDSSNFNSVVTGDEIMVEQKNKHPYSANFHMTVIQSTNGMPKMRNKTDGTYRRFIIVPFKANLKGGKDNWKIKDEYIQN KEVLQYILFHAINMDFERFVEPDVSKKIMEEYKLDNDPILDYYERIFKEYKSTRIPLYVVYEFYKYFCESNNLKPVGDRS FYKRFGEILSEEGWEKGKHKLSGKFDPADTPTGIHPYRYQQPKDSVTYVCFIKNNTLKVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| MW0751 | NP_645568.1 | putative primase | Not tested | vSa3 | Protein | 1e-136 | 43 |
| SAUSA300_0809 | YP_493509.1 | putative DNA primase | Not tested | SaPI5 | Protein | 2e-137 | 43 |
| SAOV_2058c | YP_005737501.1 | Putative DNA primase | Not tested | SaPI2 | Protein | 1e-136 | 43 |
| SAPIG0476 | YP_005733286.1 | putative primase | Not tested | SAPI-S0385 | Protein | 3e-130 | 43 |
| SAOV_0421 | YP_005735937.1 | putative DNA primase | Not tested | SaPI1 | Protein | 1e-130 | 43 |
