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Name : Sfum_0853 (Sfum_0853) Accession : YP_844985.1 Strain : Syntrophobacter fumaroxidans MPOB Genome accession: NC_008554 Putative virulence/resistance : Virulence Product : two component sigma54 specific Fis family transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 1055968 - 1057476 bp Length : 1509 bp Strand : - Note : PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: dps:DP2235 related to two-component system response regulator (Ntr family) DNA sequence : ATGGAAACCATTCTTATCGTCGACGATGAAAAGAACTATCTCCTGGTTCTCGAAGACCTCCTGGTCGAGGACGGCTACCA GGTGATTACCGCGGATTCCGCCGTGAAGGGGCTGGAGACGGTCGCCACGACGGACCTGGACGTCGTGATCACGGACATGA AAATGCCCGGCATGGACGGTATGGCCTTTCTAGAAGGCATTCATGCCCGCAATTCGGATCTGCCGGTGATCATGATGACC GCGTACGGCTCGGTGGAAAAAGCGGTCGAGGCCATGAGGATGGGGGCCTTCGATTACATCCTCAAGCCGTTCAAGAACGA AGAGCTCAAGCTCACCATCCGGAAAGCCATCGATCACTACCGCCTGGTGTGCGAGAACCGTCAGCTTACCCAGGAGCTCA AGGAGCGGTATCAGTTCAGCAACATCATCGGCAAGAGCGCTCCCATGCAGCGCATTTACCAGTTGATCGAGAAAGTCGCC CCGACCAAGGCAACCGTGCTGGTGACGGGGGAATCGGGAACCGGCAAGGAACTCATCGCCCGGGCCATTCACTACAACAG CACCCGGCACGACCGGGCGTTCATTTCCGTGAACTGCGGGGCGCTCCCCGAGACACTCCTCGAAAGCGAGCTGTTCGGGC ACGAAAAAGGAGCTTTTACCGGCGCCGCCATCCAGCGCAAAGGACGATTCGAACTGGCGCACGAGGGAACGCTGTTTCTC GATGAGATAAGCGAAATGTCGCCGCCGCTCCAGGTGAAACTGCTGCGCATCCTGCAGGAGATGGAGTTCGAACGCGTGGG CGGCAGTCAGACCATCAAGGTCGATGTCAGGGTTGTCGCCGCCTCGAATCGGAACCTCAAGGATGAGGTGGCGACGGGCC GATTCCGTGCCGATCTTTTCTATCGCCTCAACGTCGTGCATGTGGCGCTGCCGCCGTTGCGCGGCCGGATCGACGACATC CCCCTGCTGGTGAATCATTTCCTCGCCAAGTACACGCCGCAGTCGAAAGGGAAGGGGATGAGCATCTCCCCCGAAGCCTT TCGCGTTCTCCTCGAATATCACTGGCCCGGCAACGTGCGGGAACTGGAAAACGTCATCGAGCGGGCCGTGATCCTGTGCA ACGGGCAGGAAATCATGATCCGGGATCTGCCCGCCGAAATCCGGGAACCCCGTGCCGTTCCCTCGCCCGAAGCGACGCCC TCAACGGAGGGTCCGACCCTCCAGCCCGCGGACTTCCCCCCCGGCGGCGAGGCCGATACCCGGATGCCGCCATTGTCTCC CGGAGAGCGGCTTCAGCGTACCGGTTTCAAGCCTCGACAGCACAAGGCCATGGAATTCATCGAAAACCATGGTTTTATCA CCAACAAATACTATTCCCAGTTGTGCAATGTATCCGAACGGCAGGCGCTTCGCGAATTGAACGAGTTGGTCGACGCCGGC ACACTGGACCGGATAGGCAAGGGCAGGGCGTGTCGTTACGTTCTCCGGGGCCGGGGAATCGGGGGCTGA Protein sequence : METILIVDDEKNYLLVLEDLLVEDGYQVITADSAVKGLETVATTDLDVVITDMKMPGMDGMAFLEGIHARNSDLPVIMMT AYGSVEKAVEAMRMGAFDYILKPFKNEELKLTIRKAIDHYRLVCENRQLTQELKERYQFSNIIGKSAPMQRIYQLIEKVA PTKATVLVTGESGTGKELIARAIHYNSTRHDRAFISVNCGALPETLLESELFGHEKGAFTGAAIQRKGRFELAHEGTLFL DEISEMSPPLQVKLLRILQEMEFERVGGSQTIKVDVRVVAASNRNLKDEVATGRFRADLFYRLNVVHVALPPLRGRIDDI PLLVNHFLAKYTPQSKGKGMSISPEAFRVLLEYHWPGNVRELENVIERAVILCNGQEIMIRDLPAEIREPRAVPSPEATP STEGPTLQPADFPPGGEADTRMPPLSPGERLQRTGFKPRQHKAMEFIENHGFITNKYYSQLCNVSERQALRELNELVDAG TLDRIGKGRACRYVLRGRGIGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 8e-62 | 41 |
| BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 8e-62 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sfum_0853 | YP_844985.1 | two component sigma54 specific Fis family transcriptional regulator | BAC0467 | Protein | 9e-89 | 50 |
| Sfum_0853 | YP_844985.1 | two component sigma54 specific Fis family transcriptional regulator | BAC0089 | Protein | 2e-90 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sfum_0853 | YP_844985.1 | two component sigma54 specific Fis family transcriptional regulator | VFG1249 | Protein | 3e-74 | 45 |
| Sfum_0853 | YP_844985.1 | two component sigma54 specific Fis family transcriptional regulator | VFG1214 | Protein | 4e-67 | 41 |
| Sfum_0853 | YP_844985.1 | two component sigma54 specific Fis family transcriptional regulator | VFG0116 | Protein | 4e-63 | 41 |
