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Name : Sfum_0730 (Sfum_0730) Accession : YP_844863.1 Strain : Syntrophobacter fumaroxidans MPOB Genome accession: NC_008554 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 888744 - 891413 bp Length : 2670 bp Strand : - Note : TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein; KEGG: gsu:GSU1822 DNA mismatch repair protein MutS DNA sequence : ATGAACAAAATCACCCCCATGATGCAGCAATATCTCGAAATCAAGGAGAAGTATCCGGACGCGCTGCTGCTGTACCGGAT GGGGGATTTCTACGAGATGTTCATGGACGATGCGGTGACGGCATCTGGGCTCCTCGAGATCGCGCTCACCTCCCGCGACC GGCAGTCGGAAGTCAGGATTCCCATGTGCGGCGTTCCCTATCACGCCGCCGAGGGGTACATCGCCAGGCTCGTCTCGGCC GGGAAAAAGGTGGCCATCTGCGACCAGGTGGAGGATCCCAGGAAGGCGAAGGGGCTGGTGCGCAGGGAAGTCACGCGGGT GATCACTCCCGGGCTGGTCCTGGACGCGCAGAACCTCGCCGCCAAGCAGCCCAATTACCTTGCCGCGGTCTCGAATTCCA CGGCGGGCGAACGTTTCGGGCTCGCCTTCCTGGACGTCTCCACGGCCGAATTCAAGATGGTCGAGATTGAATCCCGCGAA GCCCTCCTGGAGGAGCTGATCCGGGTCTCGCCCCGCGAACTGCTCCTCTCCGATGACGACGAACATCCATGGGCCGAGGA GCTCCCGAAGCTTTACGGAATCGCCCTCACCCCCCTGGGTGCGGACAGATTCGACGGCAAGCGCGCCGAGGAAGCCCTGG TCGGCCACTTTCGGGTCCATTCCCTCGAGGGATTCGGCATTTCGGGGATGGACCTCGGAATCCGGGCGGCGGGGGCCATC CTTGCTTACATGCAGGCGAATCTCCTCGGGTCGTGCGATCACATCACGCGGCTTCTCCCATACAGCCGCGGCGACTTCAT GATCGTGGACGAAGCCGGCGTCCGCAACCTCGAGATATTCCACTCCCAGAGCTTCCAGGGCCGCAAGGGCTCGCTCATTG ACATCCTGGACGAAACCAAAACCGCCATGGGCGGGCGCAAGCTTCAGCAGTGGCTGCGGTATCCCCTGCTCGATCTCGCG CGCATCAACAACCGCCGGGAGGCGATCGCCGAACTGGCGGCGAACGCGCCCATGCGCGGCGAAACCCTGGGCCTGCTCAG CCGGATAAGCGACGTGGAACGCCTCAACGGCCGCAACAGCACGGGGACTTCGACGCCGCGGGACCTGGTGGCCCTCAAGA AGTCCCTGCAGAACCTCCCCGCCCTCGGCGCGGCGCTTGCCGAGCTCACCTCCCCAAGGCTCTCCGAGCTTCGAGCCCGC TGGGACGATCTCGCGGACGTCGCCGACATCATCGAGCGGACCCTCCTCGATCCCCCTCCACCGGGACTTGCCGCCGGGGG CGTCATTTCCGCCGGCGTCAGCGAAGAGCTCGACCATTTCGTGCGGCTGAGCCGCGACGCCAAGGGGTGGATGGCGGACT ACGAGGTCCAGCAGCGCCGGGATACGGGCATTTCCTCGCTCAAGGTCCGCTACAACAAGGTGTTCGGTTATTACATCGAG ATTTCGAACGCGAACCTCAACTCCGTCCCTGAACACTATTTTCGCAAGCAAACGCTGGTGAATGCGGAACGATTCATCAC CGAGGAGCTCAAGACCTTCGAAACTCAGGTGCTCCAAGCCGAGGAGAAGCGGCTCGAGCTCGAGCAGCAGATCTTCGCGG ATCTGCGCGCCCGGATCGCGCGGGAGGCCGGGCGCATCCAGGCCGCGGCCGACCGGATCGCCGACCTCGATTGCGTGTCC GCCCTGGCCGAGGTTGCGTGCCGCTACGACTACTGCCGCCCGGTGATGGACGAGTCCGACGCGATCCGCATTCGCGACGG CCGTCACCCGGTGATCGAGCATTACCTCAAAGACGGGACCTTCGTTCCCAACGACCTGGACATGGATCAGCGGGATCAGC AGGTGCTCGTCATAACCGGGCCCAACATGGCCGGAAAATCGACCATTCTCCGGCAGGCCGCCCTTATCGTCCTCATGGGA CACATCGGGAGTTTCGTCCCGGCATCGGAAGCGCACATCGGCCTGGTGGACCGCATATTCACCCGTGTGGGCGCATCCGA CGACCTGGCCCGCGGGCGTTCCACCTTCATGGTGGAGATGCAGGAAACCGCCAACATTCTCCATCACGCCACACCGCGCA GCCTTATCATTCTCGACGAGATCGGCCGCGGCACGAGCACCTACGACGGGCTGAGCATCGCCTGGGCGGTTGCCGAACAT TTGCACGACTTCCAGGAAAAGGGTATAAAGACGCTTTTTGCAACGCATTATCATGAACTGACGGAGTTGGCCCGCAGTCG TCCGAGGGTCAGGAATTTCAACGTGGCCATCCGGGAATGGCAGCAGGAGATCCTGTTCTTTCACAAGCTGGTCCAGGGTG GAGCGAGCCGCAGCTACGGAATCCAGGTGGCGCGACTGGCGGGCTTGCCGGAGGAAGTGACCGGGCGCGCAAGGGAAATC CTCCAGCAGCTCGAATCCGGTCATGCGCCGTTTGCGGCCGCGCCGTCCGGCGCGGCCAGGCGCGGCCGCCCGGCGCGCGA GAAGGAACCCGGCATCCAGATGAGCCTCTTTCAGCGTTCGCCGGAATGGCTCCGGGATCGCATTTTGGCCCTCGACCTGG ACAACATGACACCGATTGCCGCGCTGCAGAACCTTCATGCACTGAAAGAGCAGATACGGGGCTCCGCCGGGGAAGAACCG GCAAGCTGCGCTTCCAGGGGAAAGCGATGA Protein sequence : MNKITPMMQQYLEIKEKYPDALLLYRMGDFYEMFMDDAVTASGLLEIALTSRDRQSEVRIPMCGVPYHAAEGYIARLVSA GKKVAICDQVEDPRKAKGLVRREVTRVITPGLVLDAQNLAAKQPNYLAAVSNSTAGERFGLAFLDVSTAEFKMVEIESRE ALLEELIRVSPRELLLSDDDEHPWAEELPKLYGIALTPLGADRFDGKRAEEALVGHFRVHSLEGFGISGMDLGIRAAGAI LAYMQANLLGSCDHITRLLPYSRGDFMIVDEAGVRNLEIFHSQSFQGRKGSLIDILDETKTAMGGRKLQQWLRYPLLDLA RINNRREAIAELAANAPMRGETLGLLSRISDVERLNGRNSTGTSTPRDLVALKKSLQNLPALGAALAELTSPRLSELRAR WDDLADVADIIERTLLDPPPPGLAAGGVISAGVSEELDHFVRLSRDAKGWMADYEVQQRRDTGISSLKVRYNKVFGYYIE ISNANLNSVPEHYFRKQTLVNAERFITEELKTFETQVLQAEEKRLELEQQIFADLRARIAREAGRIQAAADRIADLDCVS ALAEVACRYDYCRPVMDESDAIRIRDGRHPVIEHYLKDGTFVPNDLDMDQRDQQVLVITGPNMAGKSTILRQAALIVLMG HIGSFVPASEAHIGLVDRIFTRVGASDDLARGRSTFMVEMQETANILHHATPRSLIILDEIGRGTSTYDGLSIAWAVAEH LHDFQEKGIKTLFATHYHELTELARSRPRVRNFNVAIREWQQEILFFHKLVQGGASRSYGIQVARLAGLPEEVTGRAREI LQQLESGHAPFAAAPSGAARRGRPAREKEPGIQMSLFQRSPEWLRDRILALDLDNMTPIAALQNLHALKEQIRGSAGEEP ASCASRGKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 2e-131 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sfum_0730 | YP_844863.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 1e-141 | 44 |
