Gene Information

Name : Sfum_0060 (Sfum_0060)
Accession : YP_844198.1
Strain : Syntrophobacter fumaroxidans MPOB
Genome accession: NC_008554
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : -
Position : 75248 - 76648 bp
Length : 1401 bp
Strand : -
Note : TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: pca:Pcar_2418 argininosuccinate lyase

DNA sequence :
ATGACGGAGAAGCTTTGGCAAGGCCGCTTCGATCAACCCACCAACAGGCAGGTCGAGGATTACACGGCTTCCATTCATTT
TGACAACAGACTGTACCGGTACGACATCGAGGGAAGCATCGCACATTGCCGCATGCTTGCCCAATGCAAGATCATATCCC
ACGACGACGCCTCCCTTATCGTCCAGGGACTGGGGGAGATCCGGCGAGAGCTCGAACGCGGGAAATTGCACCTCGGCTCC
TCCAACGAAGACATTCATATGGCGATCGAGCAGGAGCTGATGCGCAAGATCGGCGAGGTTGGAGGGAAGCTCCACACCGC
GCGCAGCAGAAACGACCAAGTCGCGCTGGACGTGCGGCTCTATATGCGGGACACGCTGCTCCAGTGCCGCGGCCTGATCC
TCCAGACGCAGAAGGTCCTGGTGAGCTGCGCCGAAGAAAACCTGGGCGTCGTGATGCCCGGCTTCACGCACTTGCAGCAT
GCTCAGCCGATTCTGCTCTCCCACCACCTCATGGCCTATTACGAGATGCTCAAACGTGATGACGAGAGGTTCGAACAGTG
CTTCCACCGGACGAATGTCCTGCCCCTGGGGAGCGCGGCGCTCGCAGGCACGACGTTTCCCATCGACATGGAATGGACGG
CCAAATATCTGAACTTCCCGCGGGTGACCTCAAACAGTATCGATGCGGTGAGCGACCGGGACTACCTGATCGAATTCGGA
GCCGCGTCGGCGATGCTCATGATGCACGTAAGCCGCCTGGCCGAGGAACTCATCCTCTGGTCCAGCACCGAATTCGACTT
CATCGAGATCAGTGACGCGTTCTGTACGGGTTCCAGCATCATGCCCCAGAAGAAGAACCCCGACGTGCCGGAGCTGATGC
GGGGCAAGACGGGACGCGTCTACGGCAATCTGATGGCGCTTCTGACCCTCACCAAGGCGCTCCCGCTGGCCTACAACCGG
GATCTTCAGGAAGACAAGGAGCCGGTTTTCGATACTGCCGATACCATCATCAGCACCTTGCGTCTCCTTTCCAGGTTGAT
CCCCGAGATTCGATTCCACCGGGAACGCATGGGCGAAATGGCCATCCAAGGCTTTACGCTCGCAACCGACCTTGCGGACT
ACCTTGTCAAGAAGGGAGTCCCGTTCCGTAAGGCTCATCATATTGTGGGTCAAATCGTGCAGTACTGCCTGAAGAACCGC
AAGCAACTGCACGATTGCACCGTCGAGGAGCTCAAGACATTCCACAAGACCATCGATCAGGACGTATTCCCGTTTCTTGA
GGTTGCCGGCGCCATCGATCAGAGGGTCTCCATCGGAGGCACCGCGACGACCCGAGTGGTGGAGGCCATCGAGAAGGCCC
GCGCCGAACTGGATGCCTTGGAGCAGTCCCTGAGTTCGTGA

Protein sequence :
MTEKLWQGRFDQPTNRQVEDYTASIHFDNRLYRYDIEGSIAHCRMLAQCKIISHDDASLIVQGLGEIRRELERGKLHLGS
SNEDIHMAIEQELMRKIGEVGGKLHTARSRNDQVALDVRLYMRDTLLQCRGLILQTQKVLVSCAEENLGVVMPGFTHLQH
AQPILLSHHLMAYYEMLKRDDERFEQCFHRTNVLPLGSAALAGTTFPIDMEWTAKYLNFPRVTSNSIDAVSDRDYLIEFG
AASAMLMMHVSRLAEELILWSSTEFDFIEISDAFCTGSSIMPQKKNPDVPELMRGKTGRVYGNLMALLTLTKALPLAYNR
DLQEDKEPVFDTADTIISTLRLLSRLIPEIRFHRERMGEMAIQGFTLATDLADYLVKKGVPFRKAHHIVGQIVQYCLKNR
KQLHDCTVEELKTFHKTIDQDVFPFLEVAGAIDQRVSIGGTATTRVVEAIEKARAELDALEQSLSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 6e-107 53
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 6e-107 53