|
Name : Sfum_3358 (Sfum_3358) Accession : YP_847466.1 Strain : Syntrophobacter fumaroxidans MPOB Genome accession: NC_008554 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 4114172 - 4115200 bp Length : 1029 bp Strand : - Note : PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: tbd:Tbd_0099 NAD-dependent epimerase/dehydratase DNA sequence : TTGAGCGCCATGGAAGCCGCCACGGAAAGCCTTCGACAGTCGCCCCGGACATGGCTTGTCACGGGTGTGGCCGGGTTCAT CGGTTCCAACCTGTTGGAACGCCTCCTCCAGCTTGACCAGCGAGTGGTCGGGCTGGACAATTTTTTTTCGGGGTCTCCTC GGAACCTCGCTGAAGTGAAATCGTCGGTCGGCCCAGGGAAATGGGAACGATTCACCTTTGCGGAAGGGGATGTCCGTGAC CCGAAGGCCTGCCTGGAAGCCTGCCGCGGAGTGGATTACGTCCTGCACCAGGCGGGATTCTGCTCGGTGCCCGCCTCGAT CGACGAACCCGCTTTGTGCAACGAGGTCAACGTCTGCGGTACGGTCAACATGCTGACGGCGGCACGCGACCTGGGGGTCG GGCGGTTTGTCTACGCATCCAGCAGTTCGGTGTATGGAGACAGCCCTGAGCTGCCCGAGAAAGAGGAGGTCATCGGCAGG CCGTTGTCCCCTTATTCCGTCACCAAGCGGACCGGCGAGCTCTATGCCGCGGCTTTTGCCGCGACCTGCGGGCTTGAAGC CGTCGGGCTGCGCTATTTCAACGTATTCGGTCCGCGGCAGGCTGCCGGCGGAGCCTATGGAGCCGTCATTCCGGCATGGA TTTCGGCAATGATCCGCGGGGAGGCCTGCTTCATCAACGGAACAGGCGAAACGAGCCGCGATTTTTGTTACGTGGAAAAC GCCGTCCAGGCCAACCTGCTTGCCGCGACCACAGGCAACGCCCAAGCCGTAAACCAAGTCTACAACGTCGCCTTCGGCGA GAGTACAAGCCTGAATGAGCTTTTTCAGATGCTTCTTGACAGACTGTCTCCGCACAATGCTCGTCTCGAGGACTATCGCC CGGTCCACCGGGATTTTCGCCCGGGCGACATCATGCACTCCGTTGCCGACATCGGCAGGGCTCGCGAGCTGCTGGGCTAC GAGCCCACTCACGACGTTGCGGCCGGCCTGGACGCGGCGCTGGAATGGTACACGAGAAATCTCCCGTGA Protein sequence : MSAMEAATESLRQSPRTWLVTGVAGFIGSNLLERLLQLDQRVVGLDNFFSGSPRNLAEVKSSVGPGKWERFTFAEGDVRD PKACLEACRGVDYVLHQAGFCSVPASIDEPALCNEVNVCGTVNMLTAARDLGVGRFVYASSSSVYGDSPELPEKEEVIGR PLSPYSVTKRTGELYAAAFAATCGLEAVGLRYFNVFGPRQAAGGAYGAVIPAWISAMIRGEACFINGTGETSRDFCYVEN AVQANLLAATTGNAQAVNQVYNVAFGESTSLNELFQMLLDRLSPHNARLEDYRPVHRDFRPGDIMHSVADIGRARELLGY EPTHDVAAGLDAALEWYTRNLP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviC | NP_458739.1 | Vi polysaccharide biosynthesis protein, epimerase | Virulence | SPI-7 | Protein | 3e-87 | 54 |
| tviC | NP_807944.1 | VI polysaccharide biosynthesis epimerase | Virulence | SPI-7 | Protein | 3e-87 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sfum_3358 | YP_847466.1 | NAD-dependent epimerase/dehydratase | VFG0430 | Protein | 1e-87 | 54 |
