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Name : Sfum_3271 (Sfum_3271) Accession : YP_847379.1 Strain : Syntrophobacter fumaroxidans MPOB Genome accession: NC_008554 Putative virulence/resistance : Unknown Product : type III restriction enzyme, res subunit Function : - COG functional category : S : Function unknown COG ID : COG4951 EC number : - Position : 4007513 - 4009870 bp Length : 2358 bp Strand : + Note : PFAM: type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; KEGG: ade:Adeh_0244 LigA DNA sequence : ATGGAGGGAGCAGGGCCGGACCGGCCGCCGGATGCGACGTTGCATGACGATCCTCGGTCCGAGCCGGCGTCGAAGGTCAC CGATCAATCGCCGGCGGAAGAGAAGATCGCTCTTTTCAGGAGCCTTTTCAGGGGCCGGGAGGACGTCTATCCCAAGCGAT TCGAGAGCCGCAAGACCGGCAAGTCGGGGTATCTTCCGGCATGCCGCAACGAATGGATCAAGCCCCGGTGCCGAAAACCC CGCGTGCGGTGCGGCGAGTGCCCGAACCGCGAATTTCTTCCCGTCACCGACGAGGTGGTGGGGAATCACCTGCTCGGAGG CGAGCGGCAGGGAAGATCGAAGCGGGACTTCACCATCGGGGTCTACCCCTTGCTTCCGGGCGAGTCCTGCCGGTTCCTTG CCGTCGACTTCGACAAGAGCGGCTGGCGGGAGGACGCGGCGGCGTTCCTGAAGACTTGCGCGGACTTCGGCGTCCCGGCC GCCCTGGAGCGTTCGCGTTCCGGGAACGGCGGCCACGTCTGGATATTCTTTACTGCGCCCGTGGACGCCGGGACGGCGCG CCGGATGGGCTCTTTTCTGCTCACGGAAACCATGGAGTCCCGGCCCGAAATGGGCCTCGACTCCTACGATCGATTCTTCC CGAGCCAGGACACTCTTCCCAAAGGGGGGTTCGGCGGCCTCATCGCTCTTCCCCTGCAGCGCCGGCCGCGCGAGACGGGC AACAGTGTATTTGTGGATGAGGCCTTCGTTCCCTTCCCCGACCAGTGGGCATACCTTTCCTCCGTGCGGCGCATGGAGCC GGGCGAAGTGGAAAACCTCGCCCAAAAAGCCGTCGCGGGCGGGCGCGTGATGGGGGTGCGCACGGTCGTAACGGACGAGG ACGATGATCCTCCCTGGACGCTCCCCCCCTCGGGGCGCCGGAAGGAGCTTCCCCTTCCGGGACCGCTCCCGCCGAGCGTT ACGCTCACCGTCGCAAACCAGGTCTACGTGGCGAAGGAAGGGCTCCCCCCCGCGTTGAGAAACCGGTTGATCCGCCTGGC GGCCTTTCAGAATCCGGAGTTCTACAAGGCTCAGGCCATGAGGCTGCCCACCTTTCAGATACCGAGGGTCATCGGGTGCT GCGAAGATTTTCCGGACCACCTGGGCCTTCCAAGGGGATGCCTGGAGGAGACGGCGGCTTTCCTGTCTTCGATCGGAATC GCACCGGTCGTGGTGGACGAGCGGTTTGGGGGCATTCCCATCGACGTCCGGTTCACCGGCACGCTGCGACCCGACCAGGA GCCGGCCGCCCGCGCCATGCTGGAACACGACACGGGAGTGCTCTCGGCGACGACGGCCTTCGGCAAGACCGTGGTGGCAG CCCGTCTCATCGCCGACCGCGGGGTGAATACGCTGGTGCTGGTCCACCGGCGGGAGCTTCTCGATCAGTGGGGCGCCCGA TTGGATGAACTGTTGGAGCTGCCCTCCGGGCGGATCGGACGGATCGGCGGCGGGAAGCGCGATCCGACCGGGATTGTGGA CGTCGCGATCATCCAGGGCCTCGTCAGAAAGGGCGTCGTGGCCGACCTGGTCGCGGAATACGGGCACCTGGTCGTCGACG AATGCCACCATATTTCCGCCCGCAGCTTCGAAACCGTCGCCCGCCAGTGCAGGGCGAAATACGTCACGGGGCTGTCCGCC ACGGTCACGCGCAAAGACGGCCATCATCCCATCATCTTCATGCAATGCGGGCCGGTCCGGCACCACGTGGACGAGCGACG GCAGGCCGCCGCCAGGCCTTTTTGCCACAGGGTGATCCCGCGTCAAACGGAATTCCTCCTGCCCGGCGCTCTCAGGCGTG AAACCGATCCGGCCATCCATGAAGTCTATGCGGCGCTGGTCCGGGACGAAAACCGAAACGGGATGATCGTCCGGGATGTG CTCGATGCCGTCGCAGCCGGGCGATTTCCGGTGATCCTGACGGAGCGCCGGGAACACCTGTCCCTGCTTGCGCAACGTCT TGTCCCGCAGGTCCGAAACGTCGTCGTCCTGCAAGGCGGCATGGGGAAAAAGCAGCGGGCGGCGGCGGCGAAAGCCCTTG CCGGGAGCGCCGAAGGGGAGGCGAGGGTGATCGTCGCCACGGGCCGGTACCTGGGCGAAGGGTTCGACGACGCCCGTCTG GATACCCTGTTCCTTGCCCTGCCGGTATCCTGGCGCGGAGTGCTCGTCCAGTATGCGGGGAGGCTGCACCGGCTCCACGA GCAAAAGAAGGACGTCCTCATCTACGATTACGCCGACCTGCGGGTGCCCATGCTGGCACGAATGTACGGCCGCCGGCGCA TGGGCTACCGCAAAATCGGCTATGCGATCCAGGAATGA Protein sequence : MEGAGPDRPPDATLHDDPRSEPASKVTDQSPAEEKIALFRSLFRGREDVYPKRFESRKTGKSGYLPACRNEWIKPRCRKP RVRCGECPNREFLPVTDEVVGNHLLGGERQGRSKRDFTIGVYPLLPGESCRFLAVDFDKSGWREDAAAFLKTCADFGVPA ALERSRSGNGGHVWIFFTAPVDAGTARRMGSFLLTETMESRPEMGLDSYDRFFPSQDTLPKGGFGGLIALPLQRRPRETG NSVFVDEAFVPFPDQWAYLSSVRRMEPGEVENLAQKAVAGGRVMGVRTVVTDEDDDPPWTLPPSGRRKELPLPGPLPPSV TLTVANQVYVAKEGLPPALRNRLIRLAAFQNPEFYKAQAMRLPTFQIPRVIGCCEDFPDHLGLPRGCLEETAAFLSSIGI APVVVDERFGGIPIDVRFTGTLRPDQEPAARAMLEHDTGVLSATTAFGKTVVAARLIADRGVNTLVLVHRRELLDQWGAR LDELLELPSGRIGRIGGGKRDPTGIVDVAIIQGLVRKGVVADLVAEYGHLVVDECHHISARSFETVARQCRAKYVTGLSA TVTRKDGHHPIIFMQCGPVRHHVDERRQAAARPFCHRVIPRQTEFLLPGALRRETDPAIHEVYAALVRDENRNGMIVRDV LDAVAAGRFPVILTERREHLSLLAQRLVPQVRNVVVLQGGMGKKQRAAAAKALAGSAEGEARVIVATGRYLGEGFDDARL DTLFLALPVSWRGVLVQYAGRLHRLHEQKKDVLIYDYADLRVPMLARMYGRRRMGYRKIGYAIQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z1568 | NP_287072.1 | helicase | Not tested | TAI | Protein | 7e-161 | 48 |
| Z1129 | NP_286664.1 | helicase | Not tested | TAI | Protein | 7e-161 | 48 |
