Gene Information

Name : Sfum_3202 (Sfum_3202)
Accession : YP_847310.1
Strain : Syntrophobacter fumaroxidans MPOB
Genome accession: NC_008554
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 3926252 - 3927181 bp
Length : 930 bp
Strand : -
Note : TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; KEGG: pca:Pcar_3063 porphobilinogen deaminase

DNA sequence :
TTGACTGATCGAGTGATTCGTATAGGAACCCGGGGCAGCATGCTTGCTCTCAAGCAGAGCGGAAACGTCAAGGCCGCCAT
GGAAGCGCTGTGGCCCGGTCTTCGGGTTGAGTTGCAGGTCGTTAGGACGACCGGCGACAAGATTCTTGATGTACCGTTGG
CCAAGGTGGGCGGCAAGGGTTTGTTCGTCAAGGAAATCGAAGATGCGCTCCTGGCGCGCACGGTGGATCTGGCCGTTCAC
AGCATGAAGGACGTGCCCGCGATCCTGCCCGAGGGGCTCGAAATCGGGGCGATTCCCAAACGCGAGGACCCGCGGGACGT
TATCGTGACCCGAACCGGGAAAGGAATCGCGGATTTGCCCATGGGAGGCCGAGTCGGCACCAGCAGCCTGAGGCGGGCTT
CCCAAATCCGCAAGCTGCGTCCCGACATCGAGATAGCGAATCTGAGGGGAAACATCGAAACCAGGCTTCGGAAGCTGACG
GAAGGGGCATTCGATGCCATCATCCTTGCAGCGGCCGGGTTGCATCGGATGGGATGGCAGAACCGCGTCACCTCCTACCT
CGACCCCGCCGATTTTCTGCCCGCCATCGGCCAGGGAGCCATCGGGATCGAGCTCCGCTGCGACGACGGGGAGGTGCGGG
AGCTTTTGGCCCCGCTGCACGACCCGGATACCCACGTCGCGGTGGAAGCGGAGCGGAGCCTCCTGAGAACGCTCGAGGGG
GGGTGCCAGGTGCCCATCGGAGGACACGCGCATCTCGTCGACGGCACGCTTACGCTCTCCGGCATGGTGGCATCCATCGA
CGGCGAGGAACTGTTCCGCGCTTCCCGGGCGGGTTCTCCGGCGCAAGCCCGGAAGATTGGCCGCGACGTCGGGATGGAGC
TCCTGGATTCCGGCGCCAGGCGTATCCTGGAGGAGATTTACCGCGCCTGA

Protein sequence :
MTDRVIRIGTRGSMLALKQSGNVKAAMEALWPGLRVELQVVRTTGDKILDVPLAKVGGKGLFVKEIEDALLARTVDLAVH
SMKDVPAILPEGLEIGAIPKREDPRDVIVTRTGKGIADLPMGGRVGTSSLRRASQIRKLRPDIEIANLRGNIETRLRKLT
EGAFDAIILAAAGLHRMGWQNRVTSYLDPADFLPAIGQGAIGIELRCDDGEVRELLAPLHDPDTHVAVEAERSLLRTLEG
GCQVPIGGHAHLVDGTLTLSGMVASIDGEELFRASRAGSPAQARKIGRDVGMELLDSGARRILEEIYRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 6e-69 53
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 6e-69 53