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Name : Sfum_3184 (Sfum_3184) Accession : YP_847292.1 Strain : Syntrophobacter fumaroxidans MPOB Genome accession: NC_008554 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 3907144 - 3908481 bp Length : 1338 bp Strand : - Note : TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; KEGG: sat:SYN_00640 replicative DNA helicase DNA sequence : GTGGATGCCATCGCGGAAGAACTCAAGAAGGTTCCGCCGCAGCAGCTGGAGGCGGAGCAGTCGCTTCTCGGGGGAATTCT GATCGATAACGACGGGTTGCCCGCGGCCCTCGAAATCATCAAGGGCGATGAGTTCTACCGGGAATCGCACCGGATCATTT TCCGCGCAATCCAGGAACTCTTCGAACGCAACGAACCGATCGATCTCGTCACCACGGCCGCCCTGCTCGCCGAGAAAAAC CAGCTTGAAGCCGTGGGAGGCGCGCCCTACCTGGCATCGCTGGTGGATGCCGTGCCGTCCGCCAGCAACGTTGCCACCTA CGCGCGGATCATCAATGAGAAGGCCCTGCTGCGCCGCCTGATCCAAACGGCCAACGAAATCAGCTCATGGTCCTATGGAG GTGGGAAGAACGTCGAGGAGATTCTCGACGAGGCGGAGTCCTCGATTTTTTCCATCACCGAAAACCGCATCCGCAACAGC TACTCGTCCCTTAAGGACATCGTCAAGAAGAGCATCGAGTCCATCGAGCGTTATCAGGAACAGCGGGACATGGTAAACGG GGTTCCCAGCCACTACCGGGATCTCGACAAGATCACCGCCGGGTTCCAGAAGTCCGACCTGATCGTCATCGCCGCGCGGC CCAGCATGGGCAAGACCGCCCTGGCATTGTGCATCGCCCGGAACGCCGCGGTCGAGAGCGGCATTCCGGTGGGGTTCTTC TCCCTGGAGATGAGCAAGGAGCAGCTGGCCATGCGCCTGCTCTGTGCCGAGGCCCGCGTCGATTCGCACAAGATCCGCAC CGGCTTTCTCAGTCAGACCGAATGCGCCAAGATGCTCACCGCCGCGGGTTCTTTCATGGACGTCCCCATTTACATCGACG ACACGCCGTCCATTTCGGCGCTGGAGCTGCGCGCCAAGGCGCGGCGGATGATGGCGGACCGCGGCCTGGGAATGGTGGTG GTGGACTACCTGCAGCTGATGCGGGGCAAGGAATCCGAACGGAGGGAACAGGAAATCTCCGACATCTCCCGGTCCCTGAA GGCGCTGGCTAAGGAGCTCAACATCCCCGTCATTGCCCTGGCGCAGCTCAACCGCAAGGTCGAGGAACGATCGGTGAAGA AGCCGATGCTGAGCGACCTGCGCGAATCGGGAGCCATCGAGCAGGACGCGGACGTGATCGCCTTCATCTACCGCGACGAA GTTTACAATCCCAACAGTCCCGACAAGGGAACCGCCGAAATCCTGATCGCAAAGCAACGAAACGGCCCCACCGGAGAAAT CCGGCTCGGCTACATCAGCTTGTACACCCGATTTGAAAATCTTGCCCTTTCATCGTGA Protein sequence : MDAIAEELKKVPPQQLEAEQSLLGGILIDNDGLPAALEIIKGDEFYRESHRIIFRAIQELFERNEPIDLVTTAALLAEKN QLEAVGGAPYLASLVDAVPSASNVATYARIINEKALLRRLIQTANEISSWSYGGGKNVEEILDEAESSIFSITENRIRNS YSSLKDIVKKSIESIERYQEQRDMVNGVPSHYRDLDKITAGFQKSDLIVIAARPSMGKTALALCIARNAAVESGIPVGFF SLEMSKEQLAMRLLCAEARVDSHKIRTGFLSQTECAKMLTAAGSFMDVPIYIDDTPSISALELRAKARRMMADRGLGMVV VDYLQLMRGKESERREQEISDISRSLKALAKELNIPVIALAQLNRKVEERSVKKPMLSDLRESGAIEQDADVIAFIYRDE VYNPNSPDKGTAEILIAKQRNGPTGEIRLGYISLYTRFENLALSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-69 | 43 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 2e-71 | 41 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-63 | 41 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 3e-67 | 41 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 3e-67 | 41 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 6e-67 | 41 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 1e-69 | 41 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 5e-70 | 41 |
