Gene Information

Name : Sfum_2959 (Sfum_2959)
Accession : YP_847068.1
Strain : Syntrophobacter fumaroxidans MPOB
Genome accession: NC_008554
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 3655534 - 3656967 bp
Length : 1434 bp
Strand : -
Note : PFAM: pyruvate kinase; KEGG: sat:SYN_02952 pyruvate kinase

DNA sequence :
ATGAGGCTTCCGGCCAACAAGACAAAAATCGTGTGCACCATCGGACCGGCATCGGACTCACCGGATGTTTTGCAGCGCAT
GATCCTGGCGGGGATGAACATCGCCCGGCTGAATTTCTCCCACGGGGATTTCGAGGGTCACGCGAGGGTTGTGGAAAACA
TCCGCAAGGCCGCTCGTGCGGCGGGACGCAGGGTATCCATCATGGCGGACCTGCCCGGCCCCAAGATAAGAATCGGGCAA
TTGGCGCAGGAGCCGATCGAGCTGAATTCCGGCGACGCCTTCACTTTGACGACGGAAAAGATCGTCGGCGGGATCGAGCG
AGTCTTCGTGAGCTTTCCGCCACTCACCGAGGTGGTAAAGCCCGGGGACCGGTTGTTTCTCAACGACGGCCAGATCGAGC
TTGAAGCTGAACGCGTGCAGGGGCTTGACGTAAGGTGCCGGGTTGTGGTGGGCGGCGAGTTGCGCTCGCGCAAGGGCCTC
AATCTGCCCCGCATCGATCTTGGCATCAGCGCCTTTACACCTCACGATCACAACTGCCTGAGATTCGCCGCGGAACAAGG
CCTCGACGCCGTGAGCCAGTCTTTCGTGGAAACGGCCGAAGACCTTCGCGCGGTCCGAAGAGCGGCCGCCGAAATCGACT
ACAATCCCTTCATCATCGCCAAGATCGAACGCGCCGGGGCACTGGATCGTATCGATGAGATACTCGACGTTGCGGATGGG
CTCATGGTCGCGCGCGGCGATTTGGGCGTCGAAATTCCCATCGAACGGATTGCCGCCGTTCAGAAACGCCTCACCAACAA
AGCGAATCAGCGCTGCAAACCGGTGATCACGGCCACTCAGATGCTGCTGTCCATGGTCGCCAATCGGAGGCCGACCCGCG
CCGAAGCCACCGACGTGGCCAATGCCATTCTCGACGGCACGGACTGCGTCATGCTTTCCGAGGAATCGGCCATGGGCAAA
TACCCCGTTGAGGCCGTCGCCATGCTTGCCGGGATTGCTTTTTCCATCGAACCGCTCCTGCCCGCGTGGCCTTTGAGGGA
TACCCTCAAGAGCGTCAGCGGGCATTGCGAGCTGACTCCCGCCGAGCTCATCGCGCTGAGCGTCGAAGCCACCCTCGAAC
GCGTCACTCCGGCCGCCGTTTTCGTCCCCACTCATGGCGGGAACACGGCGCGAAGCATCGCCCGGTTTCGTTTTCCGGTG
TGGGTTGTGGCCGTCAGCTCCAAGGAGGCCACTTGCAGGGGGCTTCAGTTCTCGTACGGGGTTTGCCCGGTCCGGGAGGA
CGACCACCCCGACGACTGGAAACAATACACCCGCGCATGGCTGGATGCCCATGAACTGGAAGGGAGCTTGACCGTCGTGA
CTGAAGGACCGTCCTCCAAACATCCGGAAGTGAACAACCGAATGGAAATTATCCGGCTCAGGGAAGAAGCATAG

Protein sequence :
MRLPANKTKIVCTIGPASDSPDVLQRMILAGMNIARLNFSHGDFEGHARVVENIRKAARAAGRRVSIMADLPGPKIRIGQ
LAQEPIELNSGDAFTLTTEKIVGGIERVFVSFPPLTEVVKPGDRLFLNDGQIELEAERVQGLDVRCRVVVGGELRSRKGL
NLPRIDLGISAFTPHDHNCLRFAAEQGLDAVSQSFVETAEDLRAVRRAAAEIDYNPFIIAKIERAGALDRIDEILDVADG
LMVARGDLGVEIPIERIAAVQKRLTNKANQRCKPVITATQMLLSMVANRRPTRAEATDVANAILDGTDCVMLSEESAMGK
YPVEAVAMLAGIAFSIEPLLPAWPLRDTLKSVSGHCELTPAELIALSVEATLERVTPAAVFVPTHGGNTARSIARFRFPV
WVVAVSSKEATCRGLQFSYGVCPVREDDHPDDWKQYTRAWLDAHELEGSLTVVTEGPSSKHPEVNNRMEIIRLREEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 4e-70 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 4e-70 41
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 3e-70 41
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 3e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfum_2959 YP_847068.1 pyruvate kinase VFG0479 Protein 2e-70 41