Gene Information

Name : Sfum_2619 (Sfum_2619)
Accession : YP_846732.1
Strain : Syntrophobacter fumaroxidans MPOB
Genome accession: NC_008554
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 3232150 - 3234312 bp
Length : 2163 bp
Strand : -
Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: dge:Dgeo_2849 potassium-translocating P-type ATPa

DNA sequence :
ATGAACGGAGTATCCGATCCCTCCGAGACCGTTCGGGAGTTGCGTTCGCTTTCGGAACAGTCGCGGCCGCTGCGTCGCGT
GAAACCCAAGCGGCTGCTCGAAAAGCAGACTGCCTTTGCGGCCCTGAGACAGGCCTTTGTGATGCTTCGGCCCGACATCC
AGTGGAATAATCCGGTGATGTTCGTGGTCGAGGTCGGCGCCATCCTGACTTTGTTGTTCATCATCGATGCGTGGTGGGGC
GGCCGGGCCGGCGAGGTGCCCATCGGCTACTTTGTCGCGGTGGACGCATGGCTTTTCCTGACGGTGCTCTTCGCCAACTT
CGCCACGGCTCTGGCCGAGGCCCGCGGCAAGGCCCAGGCCGAATCGCTCCGACGGGCGCGTCACGACACGGTGGCCTTCC
GCCTGAACGCGGCGGGGGAGGTCGAGGAGGTTTCGTCGGCGGATCTGAAGCCGGGGGACAGGGTCGTGGTGCGGTCGGGG
CAGACGATCCCGGGCGACGGGGAGATCATCGAGGGAGTGGCTTCCGTCGACGAGTCGGCGATCACGGGCGAATCGGCTCC
CGTCATTCGCGCCGCGGGCGGCGACCGGTCCGGCGTGACGGGAGGCACCGTGGTGCTCTCCGACCGGATCGTGGTCCGAA
TCACCAGCGGGTCCGGCGAATCGTTCCTGGACAGGATGATCGGCCTGGTGGAAGGGGCCATACGGCAGCGAAGCCCCAAC
GAGATCGCGCTCACCCTCGTGCTCTCGGCATTCACGCTCGTCTTCCTGATCGTGGTGATCCCGCTCTGGCCCATGTCCCG
GAACGCCGAAATGTACATGGCGGCCTACCTGGGAGTCAAAGAACCCGTCAAAGGTCTCGGCACCGATATCCCGACCCTCA
TCGCGCTCCTGGTCTGCCTGATTCCCACCACCATCGGCGCCTTGCTCGCCGCAATCGGCATCGCGGGGATGGACCGCGCC
CTGCAGGCCAACATCGTCGCCAAGAGCGGCAAGGCCGTGGAACTGGCTGGTGATGTCGACGTCGTGCTGCTCGACAAAAC
CGGCACGATCACCATCGGAAACCGGAACGCGACCACCTTTCTGCCGCTCGACGCGTACTCCGCCGCTGACGTCGGCAGGC
TGGCCGCCCTGGCATCCGCCGCCGACGAGACACCCGAGGGGAGGAGCATCGTAAAGCTCTTCGAGACCCGATTCAACACG
CCGGTCGGCGTTCCGGAGGGCGCCCGGTTCGTGCCTTTTACGGCACAAACGCGCATGAGCGGCGTCGATCTCCCCGGAGG
AAGGCGAATACGCAAGGGGGCGCCGGACGCCGTCGTCAGGTTCGTCGAAGGCAACCGGCTCGAGGTTCCCGGCGAGCTCG
GGCCGCTGGTGGATGGCGTTGCGACCAAGGGCGCCACGCCGCTGGTCGTTGCCGATGAAACCGGCGTCGCGGGCGTGGTG
GTGCTCGAAGACATTCTGAAGCCGCACATGCAGGAGCGCTTCGAGCGCCTGAGAAAGATGGGGTTGAGGACCGTCATGAT
CACCGGAGACAATCCTCTGACCGCCGCCGCCATCGCCAGGCAGGCAGGTGTGGACGATTTTCTCGCCCAGGCCACGCCCG
AGGTCAAGCTTGCCTATATCCGAAAAGAGCAGGCTGCCGGAAAGCTGGTGGCAATGATGGGCGACGGCACCAACGACGCC
CCGGCGCTGGCCCAGGCCGACGTGGCCCTGGCCATGAACGCGGGCACCCAGGCCGCCAGGGAAGCGGCCAACATGGTGGA
TCTGGACAGCGACCCCACCAAGCTGATCGAAGTCGTGGAGGTCGGAAAACAGCTCCTGATCACACGAGGCTCCCTGACGA
CCTTCTCCATTGCCAACGACATGGCCAAATACTTCGCCATCATCCCGGCGCTTTTCGCGGGGACTCTCCCGTGGCTGAAA
GCGCTCGACGTCATGCATCTGCATTCGCCGACTTCGGCGATCCTCTCGGCCGTGATTTTCAACGCGCTCATCATCCCCGC
GCTCATTCCGATCGCGCTCAAGGGAGTCCGGTACCGGGCGCTCGGCGCCGACGCCCTGCTGCGAAGGAACCTCTTGATCT
GGGGCCTGGGGGGCCTCATTTTGCCCTTTCTAGGCATCAAGCTCATCGATCTCGCCATGGTGGGCCTCCACCTGGTGGGT
TGA

Protein sequence :
MNGVSDPSETVRELRSLSEQSRPLRRVKPKRLLEKQTAFAALRQAFVMLRPDIQWNNPVMFVVEVGAILTLLFIIDAWWG
GRAGEVPIGYFVAVDAWLFLTVLFANFATALAEARGKAQAESLRRARHDTVAFRLNAAGEVEEVSSADLKPGDRVVVRSG
QTIPGDGEIIEGVASVDESAITGESAPVIRAAGGDRSGVTGGTVVLSDRIVVRITSGSGESFLDRMIGLVEGAIRQRSPN
EIALTLVLSAFTLVFLIVVIPLWPMSRNAEMYMAAYLGVKEPVKGLGTDIPTLIALLVCLIPTTIGALLAAIGIAGMDRA
LQANIVAKSGKAVELAGDVDVVLLDKTGTITIGNRNATTFLPLDAYSAADVGRLAALASAADETPEGRSIVKLFETRFNT
PVGVPEGARFVPFTAQTRMSGVDLPGGRRIRKGAPDAVVRFVEGNRLEVPGELGPLVDGVATKGATPLVVADETGVAGVV
VLEDILKPHMQERFERLRKMGLRTVMITGDNPLTAAAIARQAGVDDFLAQATPEVKLAYIRKEQAAGKLVAMMGDGTNDA
PALAQADVALAMNAGTQAAREAANMVDLDSDPTKLIEVVEVGKQLLITRGSLTTFSIANDMAKYFAIIPALFAGTLPWLK
ALDVMHLHSPTSAILSAVIFNALIIPALIPIALKGVRYRALGADALLRRNLLIWGLGGLILPFLGIKLIDLAMVGLHLVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 2e-130 55
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 2e-130 55
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 4e-124 54
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 3e-124 53
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-124 53
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-124 53
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-124 53
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-124 53