Gene Information

Name : Sfum_2521 (Sfum_2521)
Accession : YP_846634.1
Strain : Syntrophobacter fumaroxidans MPOB
Genome accession: NC_008554
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3106027 - 3106734 bp
Length : 708 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: noc:Noc_2214 ABC transporter, ATPase subunit

DNA sequence : 
ATGACCCGGAGCGACCCCGTTGTCGGCAAACCGCTGGTGTCGGTCGAGAACATCCATAAGTCCTACCGGCGGGGTTCCCA
GTCGATTTCGGTGTTGCGGGGTATAGACCTGAGCGTCGGCCGAGGGGATTTCATCGCCCTGATGGGACCCTCCGGTTCCG
GCAAGACCACCCTGCTCAACCTCATCGCCGGCCTGGACAGGCCCGACCAGGGCAGTCTGATCGTTGCCGGAACCGACATC
ACCCAACTCGGCGAGCTCGACCTGGCCCGCTGGCGGGCGATTCACATCGGGTTCATATTCCAGTTCTACAATCTCCTCCC
TGTGCTGACCGGGCTCGAAAACGTGGAGTTGCCGCTGCTGCTTCGGAATCTCAGCCGCCGGGAACGCCGCGAGCACGCCA
TGACGGCTCTCGAGTTGGTCGGGTTGGCGGACCGTGTGAAGCACACCCCGCGGGAGCTCTCCGGCGGGCAGCAACAGCGG
GTTGCCATTGCCCGGGCCATTGTGACGGACCCCACGCTGCTCGTCGCGGACGAACCCACCGGCGATCTCGACAAGAACTC
CGCCATGGAGGTGCTCGAACTGCTCGAGCAGCTCAACCGCGAATTCAACAAGACCATCATCATGGTGACCCATGACCCCA
GGGCCGCGGACAAGGCCCGGCTCATCCATCACCTGGACAAGGGCACCCTGGAGAGCCCCGGCAAGTGA

Protein sequence : 
MTRSDPVVGKPLVSVENIHKSYRRGSQSISVLRGIDLSVGRGDFIALMGPSGSGKTTLLNLIAGLDRPDQGSLIVAGTDI
TQLGELDLARWRAIHIGFIFQFYNLLPVLTGLENVELPLLLRNLSRRERREHAMTALELVGLADRVKHTPRELSGGQQQR
VAIARAIVTDPTLLVADEPTGDLDKNSAMEVLELLEQLNREFNKTIIMVTHDPRAADKARLIHHLDKGTLESPGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-26 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-26 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-26 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfum_2521 YP_846634.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-40 51
Sfum_2521 YP_846634.1 ABC transporter-like protein NC_008702.1.4606598. Protein 4e-32 48
Sfum_2521 YP_846634.1 ABC transporter-like protein CP001581.1.gene798.p Protein 6e-37 41