Gene Information

Name : Sfum_2134 (Sfum_2134)
Accession : YP_846251.1
Strain : Syntrophobacter fumaroxidans MPOB
Genome accession: NC_008554
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 2609116 - 2610189 bp
Length : 1074 bp
Strand : -
Note : PFAM: transport system permease protein; KEGG: dde:Dde_3104 iron compound ABC transporter, permease protein

DNA sequence :

ATGGAACGAACGGTTCGGCGTCACACGGTGCTGTCGGGTCATTGCGGGATTTCCGTGCTGTGCTGGGCCGGATTTGTCCT
CCTGATTGTCGTTGCCGCGTTCCTCGCTTCGGGAATCGGCTCCTTCGAAACGTCCTACCGCACGATATTCCGGCTCTGGA
TATCCCCCTTTGATTCCGATTCCGCGGCGGGCATCGATGATACGGTGCGATACATCGTTATCAACGTGCGGCTGGCCAGA
GTCTGCCTCGCATTCATCGTGGGCGCGGCACTGGCGCTTGCGGGCACCGTCTACCAGGGAGTGCTGCTCAATCCGCTGGC
CGACCCTTTCACGCTCGGGGTCTCCACGGGAGCGGCCTTCGGCGCCTCGCTGGCGATTCTTCTGGGACTGGGGGGCATGC
AGCTTTCGGGGATCAGCGGCCTGCCCCTGGCGGCCTTTGCCGGAGCGATGCTCGCGCTCTACCTGGTCTATCTGCTGGGG
CGCATTGACGGGAGGATCCACGCCACCACGCTGGTGCTTGCGGGGATCATCGTATCCACCTTTCTGTCGGCATGGATCAG
CCTCCTCAAGAGTCTGAACGAAGACTCGGTATCCACCATCGTCTTCTGGATCATGGGGAGCCTTTCGGGCAAGAGCTGGA
CTCATGCCGTCCTGGTGCTGCCATATCTGGTGGCGGGCGGGGCCGGGATACTCATCTTCACCAGGGAGCTCGATATCCTG
AGCCTGGGGGACATCCAGGCGCAACATCTCGGCGTCAACGTCCAGAGGGTACGATTCTGGCTGCTCCTGGCCGCTTCGCT
GGCGACCGCCGCGGCGGTGGCGGTGAGTGGGATCATCGGGTTCGTCGGGCTTGTTGTGCCGCATCTCGCGCGCCTGGTCG
TGGGACCCCGGCACGGGCGACTCATTCCGGCGACCCTGTTGACCGGCGGATTGCTCGTGCTCGTTTCCGACACCATCGCA
CGAAGCCTGCTGCCGAACGGCGAGGAACTGCCGGTAGGCGTCGTGACGGCGATCCTTGGAGGACCCTTCTTTTGTTACCT
GCTGCTGCATCGCAAGAAGTACCTGCAATTGTGA

Protein sequence :

MERTVRRHTVLSGHCGISVLCWAGFVLLIVVAAFLASGIGSFETSYRTIFRLWISPFDSDSAAGIDDTVRYIVINVRLAR
VCLAFIVGAALALAGTVYQGVLLNPLADPFTLGVSTGAAFGASLAILLGLGGMQLSGISGLPLAAFAGAMLALYLVYLLG
RIDGRIHATTLVLAGIIVSTFLSAWISLLKSLNEDSVSTIVFWIMGSLSGKSWTHAVLVLPYLVAGGAGILIFTRELDIL
SLGDIQAQHLGVNVQRVRFWLLLAASLATAAAVAVSGIIGFVGLVVPHLARLVVGPRHGRLIPATLLTGGLLVLVSDTIA
RSLLPNGEELPVGVVTAILGGPFFCYLLLHRKKYLQL

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
fecD	AAL08452.1	FecD	Virulence	SRL	Protein	6e-29	42

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Sfum_2134	YP_846251.1	transport system permease	BAC0163	Protein	4e-29	42

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Sfum_2134	YP_846251.1	transport system permease	VFG1043	Protein	3e-29	42