|
Name : Sfum_0179 (Sfum_0179) Accession : YP_844316.1 Strain : Syntrophobacter fumaroxidans MPOB Genome accession: NC_008554 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 215795 - 216802 bp Length : 1008 bp Strand : - Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: sat:SYN_01112 UDP-N-acetylglucosamine 4-epimerase DNA sequence : ATGAACATCCTGGTCACCGGCGCCGCGGGCTTTATCGGATACCACCTGGCATATCGGCTTCTCAAAGACGGAAACACCGT AATCGGTCTGGACAATGTCAACGATTACTATGACGTCAACCTGAAGCGGAACCGTTTGAAACGGCTTGCGCCGTTTCAAA GCTTTGCTTTCCTGAAGCTCGACCTGCACGATACGGCGGGCATCGAAGCCATGTTCAGGGAGAATGCCTTCGATGCCGTC GTGCACCTGGCCGCCCAGGCCGGTGTGAGGCATTCGCTGACCCATCCGCATTCCTACGTCGAGAGCAATCTCACCGGCTT CGTGAATATTCTCGAAGGGTGCCGACACCACCGGATCAAGCACCTCGTCTTCGCTTCGTCGAGCTCGGTCTACGGCGCCA ACGTCGTCATGCCCTTGTCGGTACACCACAACGTCGACCATCCCCTCTCGCTCTACGCCGCCACAAAAAAAGCCAATGAG CTCATGGCACACACTTACGCTCATCTTTTCGGCGTCCCCTGTACCGGGCTGCGCTTCTTCACCGTTTACGGCCCCTGGGG GCGACCCGACATGGCCCTGTTTCTCTTCACCCGCGCGATCCTTGCGGGAGAGCCCATCAGGATATTCAACTACGGCAGGA TGCGACGGGATTTCACCTATATCGACGACATTATCGAGGGCGTGGTGAGAATGATCCCCGCGCCCCCCTCACCCAACCCG CAATGGGATCGCGAATCATCGGACCCGGCCACGAGCTACGCCCCTTACCGGGTGTACAACATCGGCAACAACCGGCCCGT GGAGCTGATGGAGTACGTGGCGGCCATCGAAAGCTGCCTGGGGAAGGAAGCACAAAAGGAATTCCTGCCGCTCCAGCCGG GGGACGTTCCGGCAACCTGCGCCGACGTCAGCGACCTGGAGCGGGATTTCGGGTTCCGGCCAAGCACCACGATTCAGGAA GGAATCACGCGGTTCATCGAATGGTACAGGGCTTACTATTCGGTGTAA Protein sequence : MNILVTGAAGFIGYHLAYRLLKDGNTVIGLDNVNDYYDVNLKRNRLKRLAPFQSFAFLKLDLHDTAGIEAMFRENAFDAV VHLAAQAGVRHSLTHPHSYVESNLTGFVNILEGCRHHRIKHLVFASSSSVYGANVVMPLSVHHNVDHPLSLYAATKKANE LMAHTYAHLFGVPCTGLRFFTVYGPWGRPDMALFLFTRAILAGEPIRIFNYGRMRRDFTYIDDIIEGVVRMIPAPPSPNP QWDRESSDPATSYAPYRVYNIGNNRPVELMEYVAAIESCLGKEAQKEFLPLQPGDVPATCADVSDLERDFGFRPSTTIQE GITRFIEWYRAYYSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-102 | 59 |
