Gene Information

Name : Sfum_1475 (Sfum_1475)
Accession : YP_845599.1
Strain : Syntrophobacter fumaroxidans MPOB
Genome accession: NC_008554
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 1830871 - 1832316 bp
Length : 1446 bp
Strand : +
Note : PFAM: pyruvate kinase; KEGG: sat:SYN_02952 pyruvate kinase

DNA sequence :
ATGACACTGCCGCTCAACAAGACCAAAATCGTATGCACCATAGGGCCCGCTTCGCGTTCCCCGGAGGTGATGCAGTCGCT
GCTGCTGGCCGGCATGAACGTCGCGCGGCTCAATTTCTCGCACGGTGATTTCTCGGGTCACAAAGGGGTGATCGAAGATC
TCCGGGCCGCGGCCGCCGCCACCGGCCGTCGCATTGCCATCATGGCGGACCTTCCCGGCCCGAAGATGCGCATCGGCAGG
TTCGGTTCCGAACCGATCGACCTGAAACCGGGGGACCTGTTCACCCTCACGACCGACGACGTGCCCGGAGACGAACGCAA
GGTCTCCGTCAGCTTCTCCCCTCTCCCCCGGGTCGTCAGACCCGGCGACACGCTCTACCTGAACGACGGCCTGATCCAGG
TGGATGTGGACCGGGTGCGGGACAGCGACGTCGACTGCCGCGTCGTGGTCGGCGGTGAGCTGCGCTCGTGCAAGGGGCTC
AACCTCCCGGGCATCGACCTGGGCATCAGCGCCTTCACCGAACACGACCACAACTGCTTGAAATTCGCTCTCGAGAACGG
TGTCGACGCGGTGAGCCAGTCGTTCGTCGAGAGCCCGGAGGACATCCGGGCGGTGAGGAACGCGGCGGCGGCCCTGGGCT
ACCGTCCCTTCATCATCGCCAAGATCGAACGATCCAGGGCGCTCGATCATCTCGACGACATCATCACCGCGGCGGACGCC
GTCATGATCGCGCGAGGCGACCTGGGCGTGGAGCTCCCCATCGAGCAGATCCCCGTGGTTCAGAAACAGATCACGCGCGC
GGCGAACATGCGCGCCAGGCCGGTCATCACCGCGACGCAGATGCTGGAATCCATGACGGCCAACCGGCGCCCCACCCGCG
CGGAGGCGACCGATGTGGCCAACGCGATCCTCGATGGCTCGGACTGCGTCATGCTCTCGGGCGAGTCGGCCATGGGCGCC
TATCCCGTCGACTCGGTCGCGACCCTTGCCAGGATCGCCGCCGCCATCGAGCCGCACCGCCCGATGGTCAGCGCCAGAGA
CCTGTTCAGGGGCATCGAGCTCAAGGGCAGGGTGCCCGCGGCAAGGCTGATCGACCTCAGTGTGGAGACCGTCCTGGAGT
ACGCCGACCCGGCCGCCGTCTTCGTCCCCACGCACCGCGGAGACACGGCCAGGAGCATCGCCCGGTTCCGCCTCCCGGCG
TGGATCATTGCCGTCAGCTCGGAGGAAGCCACGTGCCGGCAGCTCCAGTTTTCCTCGGGTGTCTACCCCGTATGCGAGGC
CCGGCACCCCGACAACTGGAACGCCTACGTGTCGGACTGGCTCAAGGCTCACGGGATGGAAGGAAATCTCGCTGTGGTGA
CCGAAGGCCCTTCGAGGCGCTATCCCGACGCCAACAACCGCCTCGAGATCGTGAACATGGCCTGGCCGGAAGAGATGGAC
GGATGA

Protein sequence :
MTLPLNKTKIVCTIGPASRSPEVMQSLLLAGMNVARLNFSHGDFSGHKGVIEDLRAAAAATGRRIAIMADLPGPKMRIGR
FGSEPIDLKPGDLFTLTTDDVPGDERKVSVSFSPLPRVVRPGDTLYLNDGLIQVDVDRVRDSDVDCRVVVGGELRSCKGL
NLPGIDLGISAFTEHDHNCLKFALENGVDAVSQSFVESPEDIRAVRNAAAALGYRPFIIAKIERSRALDHLDDIITAADA
VMIARGDLGVELPIEQIPVVQKQITRAANMRARPVITATQMLESMTANRRPTRAEATDVANAILDGSDCVMLSGESAMGA
YPVDSVATLARIAAAIEPHRPMVSARDLFRGIELKGRVPAARLIDLSVETVLEYADPAAVFVPTHRGDTARSIARFRLPA
WIIAVSSEEATCRQLQFSSGVYPVCEARHPDNWNAYVSDWLKAHGMEGNLAVVTEGPSRRYPDANNRLEIVNMAWPEEMD
G

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 5e-57 42
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 3e-57 42
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 3e-57 42
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 6e-57 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfum_1475 YP_845599.1 pyruvate kinase VFG0479 Protein 1e-57 42