|
Name : Sfum_1218 (Sfum_1218) Accession : YP_845345.1 Strain : Syntrophobacter fumaroxidans MPOB Genome accession: NC_008554 Putative virulence/resistance : Unknown Product : homoserine dehydrogenase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0460 EC number : 1.1.1.3 Position : 1504634 - 1505956 bp Length : 1323 bp Strand : - Note : catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine DNA sequence : ATGCGCTCTATCAGAGTTGGACTGATCGGTTGGGGGACGGTGGGTTGCGGGGTCATCCAGGTGTTGCGCGAAAATGAGGC GGACATACGGAATCGCCTTGGAGTGCCGCTCGAATTGCGGCGCGTGGCCGATCTGGATATCGACCGACCGAGGCCCGTGT CGGTGCCGCGGGACCTGCTGACCAACCGTATTGACGACATTCTCAACGACCCGGACATCGACATCGTGGTGGAATTGATC GGAGGGCTGGATGCGGCGCGGGAGGTCATTCGCCGGGCGATCGATTCCGGCAAGCACGTGGTTACGGCGAACAAGGCGCT GCTGGCGCATTCCGGCAACGAACTGTTCCGGGTTGCGGCCGAGCGGGGGCGCGCCATCGGCTTCGAGGCTTCCGTGGCTG GAGGAATCCCGCTCATCAAGGCTTTGCGCGAAGGGCTCGCGGGAAACCGTATCCAGACGATTTTCGGTATCCTGAACGGC ACGGCCAACTATATCCTCACCCGCATGGCGGAAGGGGGGCTTTCCTTCGAAGACGCTCTGGGCGAGGCCCAGCAGATGGG GTACGCCGAAGCGAACCCGGCGCTCGACGTGGAAGGAATCGACACGGCACACAAGCTGGCCATAGCGAGCGCCCTGTCCT TCGGCACTCCCATTCGTTTCGACGAGGTTTACACGGAAGGCATCTCGCACATCGACCCTGACGATATTCAATTCGGGGAG GAATTCGGCTACAGTCTGAAATTGCTCGCCATCGCGCGCCACATGGACGGACGCATCGAAACCCGGGTGCATCCGACGCT CATACCGCGTCATCATGTGCTCGCCAGCGTAAAGGGGGCTTACAACGCCGTGCATGTTCAGGGCAATGCGGTGGGGAATA TCATGCTCTACGGCATGGGGGCGGGCATGATGCCGACGGGAAGCGCCGTGGTCGGCGATCTGATCGACCTGGCTCGCGAC ATCCTCGGCAGCACCCCGGGACGAGTCCCGGCGCTCGCTTTCCAGCCGGATCGATTGGCCGAAATCGCGATAAAGCCGAT AGCCGATGTCTCCACCTGTTACTATTTCCGTTTTTCCGCCCTCGATCAGCCCGGAGTCCTGTCGAAGGTCTCGGGGATTC TGGGGAAATTCCACATCAGCATCGCCGCGGTGATCCAAAAGGGTCGTCGGAAGGCTTCTTCGGTACCCATCGTGATGCTG ACTCACGAAGCGCTGGAGAGTAATGTGAGGGCGGCACTGGCCGAAATCGACCAGCTCGATATCGTGACGGCTCCGACTCA GATCATTCGGATCGAAAACCAGGAAACGAACAATTTCTTCTGA Protein sequence : MRSIRVGLIGWGTVGCGVIQVLRENEADIRNRLGVPLELRRVADLDIDRPRPVSVPRDLLTNRIDDILNDPDIDIVVELI GGLDAAREVIRRAIDSGKHVVTANKALLAHSGNELFRVAAERGRAIGFEASVAGGIPLIKALREGLAGNRIQTIFGILNG TANYILTRMAEGGLSFEDALGEAQQMGYAEANPALDVEGIDTAHKLAIASALSFGTPIRFDEVYTEGISHIDPDDIQFGE EFGYSLKLLAIARHMDGRIETRVHPTLIPRHHVLASVKGAYNAVHVQGNAVGNIMLYGMGAGMMPTGSAVVGDLIDLARD ILGSTPGRVPALAFQPDRLAEIAIKPIADVSTCYYFRFSALDQPGVLSKVSGILGKFHISIAAVIQKGRRKASSVPIVML THEALESNVRAALAEIDQLDIVTAPTQIIRIENQETNNFF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00309 | YP_008211635.1 | Homoserine dehydrogenase | Not tested | AbaR26 | Protein | 9e-84 | 48 |
| BJAB07104_00305 | YP_008207770.1 | Homoserine dehydrogenase | Not tested | AbaR25 | Protein | 9e-84 | 48 |
