Gene Information

Name : Mthe_0919 (Mthe_0919)
Accession : YP_843347.1
Strain : Methanosaeta thermophila PT
Genome accession: NC_008553
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1002340 - 1003233 bp
Length : 894 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGGAGCTGGAGAATCTTCGATTCGGTACGGAGCTGCTGAAGCGCGGCTTTGCCAAGATGCAGAAGGGTGGAGTCATCAT
GGACGTCACCACCCCTGAGCAGGCCATGATCGCTGAGGAGGCAGGAGCTGTCGCTGTCATGGCACTCCATGCGGTTCCCG
CCGATATCAGAAAGATGGGTGGCGTGGCCAGGATGGCGGATCCAAAGGTCATCGAGGAGATCATCGATGCCGTGACCATA
CCTGTTATGGCCAAGGTCAGGATCGGCCACTTCGTAGAGGCGCAGATCCTGGAGGCGATAGGGGTGGACATGATCGACGA
GTCGGAGGTTCTCACCCCTGCGGACGAGTTTCACATCGACAAAACCAAATTCAAGGTTCCGTTCGTATGCGGCGCCAGGA
ACCTCGGGGAGGCCCTCAGACGTATCAAGGAAGGAGCAGCCATGATACGTACCAAGGGCGAGGCGGGTACAGGTGATGTC
AGCCAGGCGGTGAGGCACATGAAGATGATCATGGGCGACATCCGGAAGCTCAAGGGCATGAACAGCGAGGAGCTGATGAA
GTTCGCGCGCGAGATCGAAGCAGATCCGGAGCTGGTCGCCGAGTGTGCCCGGATACAACGGCTGCCTGTGGTGAACTTTG
CCGCCGGTGGCATAGCAACACCAGCAGACGCCGCTCTGATGATGCAGCTCGGCGCTGATGGTGTGTTCGTCGGCTCCGGC
ATATTCAAGTCCGAGAACCCGGAGGCGATGGCTTCCGCAATAGTCGAGGCTGTGCATCACTACGACGAGCCTGAGGTTCT
AGCCAAGGTCTCCAGAGGTCTTGGAAGGCCGATGAAGGGCATAGACGTCGGCACCCTTCATGAAGGAGAGGCGCTGCAGG
CAAGAGGCTGGTGA

Protein sequence :
MELENLRFGTELLKRGFAKMQKGGVIMDVTTPEQAMIAEEAGAVAVMALHAVPADIRKMGGVARMADPKVIEEIIDAVTI
PVMAKVRIGHFVEAQILEAIGVDMIDESEVLTPADEFHIDKTKFKVPFVCGARNLGEALRRIKEGAAMIRTKGEAGTGDV
SQAVRHMKMIMGDIRKLKGMNSEELMKFAREIEADPELVAECARIQRLPVVNFAAGGIATPADAALMMQLGADGVFVGSG
IFKSENPEAMASAIVEAVHHYDEPEVLAKVSRGLGRPMKGIDVGTLHEGEALQARGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-79 67
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-79 67
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-79 66